Gene Information

Name : SLG_29070 (SLG_29070)
Accession : YP_004836039.1
Strain : Sphingobium sp. SYK-6
Genome accession: NC_015976
Putative virulence/resistance : Virulence
Product : putative AlpA family transcriptional regulator
Function : -
COG functional category : K : Transcription
COG ID : COG3311
EC number : -
Position : 3148743 - 3148946 bp
Length : 204 bp
Strand : -
Note : -

DNA sequence :
ATGTCCAACAAGGAAAAGATTATCCGTCTCAAGACCGTGCTGACCCGCACGGGGCTTTCCCGCTCCACCCTGTATCGCAA
GATCGCGGAAGGCAGCTTCCCCCGACAAATCACAATCAGCGTCCACGGCACCGGCTGGCATGAGTCCGCCGTGGATCGCT
GGATCGCCAACCCCGCCGCCTACCGCGAGGATCGCGCCGAGTGA

Protein sequence :
MSNKEKIIRLKTVLTRTGLSRSTLYRKIAEGSFPRQITISVHGTGWHESAVDRWIANPAAYREDRAE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC1809 NP_231443.1 transcriptional regulator Not tested VPI-2 Protein 3e-09 45
VC0395_A1406 YP_001217349.1 transcriptional regulator Not tested VPI-2 Protein 3e-09 45
VPI2_0041 ACA01856.1 predicted transcriptional regulator Not tested VPI-2 Protein 2e-09 45
unnamed CAA21398.1 - Not tested HPI Protein 1e-06 43
unnamed CAB46594.1 DNA-binding protein Not tested HPI Protein 8e-07 43
PMI2608 YP_002152324.1 prophage regulatory protein Not tested Not named Protein 4e-05 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SLG_29070 YP_004836039.1 putative AlpA family transcriptional regulator VFG1141 Protein 8e-10 45