Gene Information

Name : fliP (SLG_02830)
Accession : YP_004833415.1
Strain : Sphingobium sp. SYK-6
Genome accession: NC_015976
Putative virulence/resistance : Virulence
Product : flagellar biosynthetic protein FliP
Function : -
COG functional category : N : Cell motility
COG ID : COG1338
EC number : -
Position : 294213 - 295025 bp
Length : 813 bp
Strand : -
Note : -

DNA sequence : 
ATGGCTAGGATGCTGCGGCTCTTCCTGCTCATGCTGGCGTTTGTCGCCGGCGCGGCGCTCATGGCCGATCCCGCGCTGGC
GCAGGCCGCGCAGGCACCGGCCACCGGGGCCGTCGCGCCCGCCGCGGCGGATGCCTCCGGCGCGCTGACCCGCGCTCTGG
ACGATGTTTCGGGCGAGGGCCGCCCGCTCTCGCTCTCGCTGCAGATCCTCGTCCTCATGAGCCTGCTGACGGTGCTGCCG
TCGCTCGTGCTCATGATGACCAGCTTCACCCGCATCATCATCGTGCTTTCGCTGTTGCGCCAGGCCCTCGGCCTTGCCCA
GACGCCGCCGAACCAGGTGCTGGTCGGCCTTGCCCTCTTCCTCTCGATGTTCGTGATGCGGCCTGCGATCGACCAGATCT
CCGCCACGGCCTACACGCCTTATGGCGAGGGGCAGATCACGGTGGAGGAAGCGATCAGCCGCTCAGCCCGGGTGCTCCAC
GGCTTCATGACCAAGCAGACCCGCCAGAGCGACCTCGCGCTGTTCCAGAACCTCGCCAATGCGCCGGCCTTTCGCTCGCC
GGACGACATTCCCTTCTCCATCCTGCTGCCAGCCTTCGTGACCAGCGAGCTCAAGACGGCCTTCCAGATCGGCTTCATGA
TCTTCCTGCCGTTCCTCATCATCGATCTGGTGGTCTCGTCCACGCTGATGGCGCTCGGCATGATGATGCTCTCGCCGACG
ATCATATCGATGCCGTTCAAGCTGCTGCTCTTCGTGCTGGTCGACGGCTGGGCCCTGACCATGGGCAGCCTCGCTGCGTC
GTTCGCGACATGA

Protein sequence : 
MARMLRLFLLMLAFVAGAALMADPALAQAAQAPATGAVAPAAADASGALTRALDDVSGEGRPLSLSLQILVLMSLLTVLP
SLVLMMTSFTRIIIVLSLLRQALGLAQTPPNQVLVGLALFLSMFVMRPAIDQISATAYTPYGEGQITVEEAISRSARVLH
GFMTKQTRQSDLALFQNLANAPAFRSPDDIPFSILLPAFVTSELKTAFQIGFMIFLPFLIIDLVVSSTLMALGMMMLSPT
IISMPFKLLLFVLVDGWALTMGSLAASFAT

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
XC_3016 YP_244084.1 type III secretion system protein Virulence Hrp PAI Protein 4e-28 42
hrcR NP_636600.1 type III secretion system protein Virulence Hrp PAI Protein 4e-28 42
hrcR BAB07862.1 HrcR Virulence Hrp PAI Protein 3e-27 41
ssaR CAA68199.1 secretion system apparatus, SsaR Virulence SPI-2 Protein 9e-29 41
yscR NP_456109.1 putative type III secretion protein Virulence SPI-2 Protein 4e-28 41
yscR NP_805090.1 type III secretion system protein Virulence SPI-2 Protein 4e-28 41
ssaR YP_216427.1 type III secretion system protein Virulence SPI-2 Protein 1e-28 41
ssaR NP_460384.1 type III secretion system protein Virulence SPI-2 Protein 1e-28 41
hrcR YP_198720.1 type III secretion system protein Virulence Hrp PAI Protein 3e-27 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
fliP YP_004833415.1 flagellar biosynthetic protein FliP VFG0519 Protein 5e-29 41