Gene Information

Name : SLG_27210 (SLG_27210)
Accession : YP_004835853.1
Strain : Sphingobium sp. SYK-6
Genome accession: NC_015976
Putative virulence/resistance : Virulence
Product : NAD-dependent aldehyde dehydrogenase
Function : -
COG functional category : C : Energy production and conversion
COG ID : COG1012
EC number : -
Position : 2931424 - 2932950 bp
Length : 1527 bp
Strand : +
Note : -

DNA sequence :
ATGGCCTCCATCGTTCAGGATCGACCAATCGCGAGACTCAAGTCGCCATTCGCGGCGCGCTATGACAATTTCATCGGCGG
TCAATGGGTCGCTCCCAAAGCGGGGCGCTATTTCGAGAATGTCTCGCCGGTCACCGGCAACCCGGTGGGCGAAATCGCCC
GATCGCAAGCCGAAGATATCGCTGCCGCGCTCGATGCCGCGCATGCCGCCAAAGATGCATGGGGCCAGACCTCCGTCACG
GAACGCGCGCTGATCCTCAACCGCATCGCGGACCGGATGGAGGCCAATCTCGAAAAGCTCGCCACGGCCGAGACATGGGA
CAATGGCAAGCCGATCCGCGAGACCATGGCCGCCGATCTCCCGCTCGCCATCGATCATTTCCGCTATTTCGCAGGCGCCA
TCCGCGCGCAGGAGGGGTCTCTTGGCGAGATCGATCATGACATGGTGGCCTATCATTTCCATGAGCCGCTAGGCGTGGTC
GGCCAGATCATTCCGTGGAATTTCCCATTGCTGATGGCCGCCTGGAAAATGGCGCCCGCGCTGGCTGCCGGCAATTGCAT
CGTGCTGAAGCCGGCCGAACAGACACCGGCCTCCATCATGGTGTGGATCGATCTGGTAGGCGACCTGCTGCCGCCCGGCG
TGCTCAACATCGTCAACGGCTTCGGGCTTGAAGCGGGCAAGCCGCTGGCCACCTCACCGCGGATTTCAAAGATCGCCTTC
ACCGGCGAGACAACGACCGGCCGCCTCATCATGCAATATGCCAGCGAGAACCTCATCCCGGTGACGCTGGAACTGGGCGG
CAAGTCGCCCAACATCTTCTTCGAGGATGTCGTGCGCGAGGATGATGACTATCTCGACAAGGCGATCGAGGGCTTCGTCA
TGTTCGCGCTCAATCAGGGCGAGGTGTGCACCTGCCCCAGCCGCGCGCTGATCCATGAAAAGATCTACGATCGCTTCATG
GAAAAAGCCCTGAAAAGGGTGGCCGCCATCGTGCAGGGCAGCCCGCTCGATCCGGCCACGATGATTGGGGCGCAGGCATC
ATCGGAACAACGCGAGAAGATCCTCTCCTATATCGATATCGGCAAGCAGGAAGGCGCCGAACTGCTGATCGGCGGCGGGG
CGGCGGATCTGGGCGGCGAGCTGTCGGGCGGCTACTATGTCCAGCCGACGGTCTTCAGGGGCCACAACAAGATGCGTATC
TTCCAGGAGGAGATCTTCGGCCCGGTCCTGTCCGTCACCACTTTCAAGGATGAGGCCCAGGCGCTGGAGATTGCCAACGA
CACGCTTTACGGCCTTGGCGCCGGCGTGTGGAGCCGCGAAGCCAACACCTGCTATCGCTTCGGCCGCGGCATACAGGCCG
GGCGCGTCTGGACCAACTGCTACCATGCCTATCCCGCTCATGCGGCCTTCGGTGGCTACAAGCAGTCCGGCATCGGACGA
GAGAATCACAAGATGATGCTCGATCACTATCAGCAGACCAAGAATATGCTGGTCAGCTACAGCCCCAGGAAGCTCGGCTT
CTTCTGA

Protein sequence :
MASIVQDRPIARLKSPFAARYDNFIGGQWVAPKAGRYFENVSPVTGNPVGEIARSQAEDIAAALDAAHAAKDAWGQTSVT
ERALILNRIADRMEANLEKLATAETWDNGKPIRETMAADLPLAIDHFRYFAGAIRAQEGSLGEIDHDMVAYHFHEPLGVV
GQIIPWNFPLLMAAWKMAPALAAGNCIVLKPAEQTPASIMVWIDLVGDLLPPGVLNIVNGFGLEAGKPLATSPRISKIAF
TGETTTGRLIMQYASENLIPVTLELGGKSPNIFFEDVVREDDDYLDKAIEGFVMFALNQGEVCTCPSRALIHEKIYDRFM
EKALKRVAAIVQGSPLDPATMIGAQASSEQREKILSYIDIGKQEGAELLIGGGAADLGGELSGGYYVQPTVFRGHNKMRI
FQEEIFGPVLSVTTFKDEAQALEIANDTLYGLGAGVWSREANTCYRFGRGIQAGRVWTNCYHAYPAHAAFGGYKQSGIGR
ENHKMMLDHYQQTKNMLVSYSPRKLGFF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC0819 NP_230467.2 aldehyde dehydrogenase Not tested VPI-1 Protein 2e-129 64
aldA AAK20747.1 aldehyde dehydrogenase Virulence VPI Protein 4e-135 64
aldA AAK20776.1 aldehyde dehydrogenase Virulence VPI Protein 4e-135 64
aldA AAC12273.1 aldehyde dehydrogenase Virulence VPI Protein 4e-135 64
aldA-1 YP_001216300.1 aldehyde dehydrogenase Not tested VPI-1 Protein 3e-134 64

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SLG_27210 YP_004835853.1 NAD-dependent aldehyde dehydrogenase VFG0082 Protein 9e-130 64