Gene Information

Name : SLG_23360 (SLG_23360)
Accession : YP_004835468.1
Strain : Sphingobium sp. SYK-6
Genome accession: NC_015976
Putative virulence/resistance : Unknown
Product : transketolase
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG0021
EC number : -
Position : 2519181 - 2521148 bp
Length : 1968 bp
Strand : -
Note : -

DNA sequence :
ATGCCAGTCACCGAAAAGCGCCTTGCCGACACGATCCGTGTGCTGGCGATGGACGCGGTGCAGGCAGCCAATAGTGGCCA
TCCCGGCATGCCGATGGGCATGGCCGACGTCGCCACCGTGCTGTTCAAGGACCATGTGAAGTTCGATCCGGCCGCGCCGA
AATGGGCGGATCGGGATCGGTTCGTGCTGTCCGCCGGCCATGGCTCGATGCTGATCTACGCGCTGCTGCACCTCACCGGC
TATGAAGAGCCCACGATGGCGCAGATCGCGGCCTTCCGCCAGGTCGGCAGCCCTTGTGCGGGGCATCCGGAGAATTTCGA
GCTGCCGGGCGTGGAAGCCACGACCGGTCCCCTGGGGCAGGGGCTTGCCATGGCGGTCGGCATGGCGATGGCCGAGCGGC
ACCTCAATGCCACCTTCGGGGACGAACTCGTCGATCACCGCACCTGGGTGATCGCTGGCGACGGCTGCCTCATGGAAGGC
ATCAATCATGAGGCGATCGGCCTTGCCGGTCATCTCGGCCTTGGCCGTCTCACCGTGCTGTGGGACGACAACAAGATCAC
CATCGACGGGTCCGTCGACCTCTCGTCGAGCGAAGACGTGCTGGCGCGCTATGCGGCGACCGGTTGGCACGTGACGCATT
GCGACGGGCATGATTTCGCGGATATCCGCCGCGCGCTGGCCGAGGCCGTGGCCGATCCGCGCCCCTCGATCGTCGCGTGC
CGCACGCGCATTGGGCAGGGCGCACCGAACATGGCGGGTTCGCACAAGGTGCATGGCGCGCCGCTCGGCAAGGACGAGAT
CGCCGCTACCCGGCAGGCGCTGGACTGGGATCTGCCGCCCTTCGAGCTGCCCGAGGATGTCCGCACCGCATGGCTCGCCA
TTGGCCAGCGCTCCCGCCCGGCTCATGCACAGTGGCAGGATCGCCTCTCAAGTCATTCCCAAAAAACGGAATTCGAGCGC
CGGATGGCGGGCGATCTGCCCGCCGACTTCTCGCTGCGGCCCTATCTTGATGGCCTGATCGCCGAGCCCAAGAAAGTCGC
GACCCGCAAGGCGAGCGAGATGGCGCTGGACGCGATCAACGTGCAGCTCCCCGAGATGTTCGGCGGATCGGCCGATCTCA
CCGGCTCCAACCTCACGCAGTCGAAGGACCAGAAGGCCGCCTTCAGCCGCGATGATCGTGCCGGCCGCTATGTCTATTAC
GGCATTCGCGAATTCGGCATGGCGGCGGCCATGAACGGCATGGCGCTGCACGGCGGCGTCATTCCTTATGGCGGCACGTT
CCTCGTCTTCTCCGATTATATGCGCAATGCCATCCGCATGTCCGCGCTGCAGCGGCTGCGCGTGGTCTATGTGCTCACGC
ATGACAGCATCGGGCTTGGCGAGGATGGTCCCACGCACCAGCCGATCGAGCATGTCATGTCGTTGCGCATGATCCCCAAT
CTGGAGGTGTTCCGGCCGTGCGACGTGATCGAGACGGCGGAATGCTGGGAACTGGCGCTTGCCCAGCAGAGCACGCCGTC
GGTGCTCGCACTCAGCCGGCAAAACCTGCCGCAACTGCGTGATAATGCATCAGAAAATCTGTCCGCGAAGGGCGCCTACA
CGCTCGTTTCCGGCGGCGATTCTCCGCGCGTGGTGCTGATCGGCACCGGCTCGGAAGTGGAGATCGCGGTCGAGGCGGCG
AAGCAGCTCGGCGAACAGGGCATTGCCGCGAGCGTCGTGTCGATGCCCAGCATGTCGCGTTTCCTCGCGCAGGACGAGGC
CTATCGCGCTGCCGTCCTGCCGGCCGGCGCGCTGCGCGTCACCATCGAGGCGGGCACGACCTTCGGCTGGTGCGCGATCA
CCGGCGCGGACGGGCTTAACATCGGCATCGACCAGTTCGGCCTGTCCGGACCGGCACCGGCCCTCTACGAACATTTTGGA
TTGACCGCCGGGGCGATCGCGCAACGCGTCCTCGCGGCGCTCGACTGA

Protein sequence :
MPVTEKRLADTIRVLAMDAVQAANSGHPGMPMGMADVATVLFKDHVKFDPAAPKWADRDRFVLSAGHGSMLIYALLHLTG
YEEPTMAQIAAFRQVGSPCAGHPENFELPGVEATTGPLGQGLAMAVGMAMAERHLNATFGDELVDHRTWVIAGDGCLMEG
INHEAIGLAGHLGLGRLTVLWDDNKITIDGSVDLSSSEDVLARYAATGWHVTHCDGHDFADIRRALAEAVADPRPSIVAC
RTRIGQGAPNMAGSHKVHGAPLGKDEIAATRQALDWDLPPFELPEDVRTAWLAIGQRSRPAHAQWQDRLSSHSQKTEFER
RMAGDLPADFSLRPYLDGLIAEPKKVATRKASEMALDAINVQLPEMFGGSADLTGSNLTQSKDQKAAFSRDDRAGRYVYY
GIREFGMAAAMNGMALHGGVIPYGGTFLVFSDYMRNAIRMSALQRLRVVYVLTHDSIGLGEDGPTHQPIEHVMSLRMIPN
LEVFRPCDVIETAECWELALAQQSTPSVLALSRQNLPQLRDNASENLSAKGAYTLVSGGDSPRVVLIGTGSEVEIAVEAA
KQLGEQGIAASVVSMPSMSRFLAQDEAYRAAVLPAGALRVTIEAGTTFGWCAITGADGLNIGIDQFGLSGPAPALYEHFG
LTAGAIAQRVLAALD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tktA AAO17218.1 TktA Not tested tcd island Protein 1e-151 51
APECO1_2641 YP_859417.1 transketolase Not tested Not named Protein 3e-148 49