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Name : gspE (SLG_13760) Accession : YP_004834508.1 Strain : Sphingobium sp. SYK-6 Genome accession: NC_015976 Putative virulence/resistance : Virulence Product : general secretion pathway protein E Function : - COG functional category : N : Cell motility COG ID : COG2804 EC number : - Position : 1497222 - 1498775 bp Length : 1554 bp Strand : + Note : - DNA sequence : ATGATCGATCCGTCCCGGAACGATCCCGAAGTGCCTCCCGGCGAGGGACCGGACCGGGCCGTGCTGCCGATCGACATCCC CTATGGCTTCGCGCGCCGGCACGGCGTGGTCATCACCTCGCTGGCGACCGGCGACGACCCTGCCGAGCGGATCACGATCG CCTTGCGCGAAGGCGCGGACCCGCGCGTGCTCGTGGAGGTGCGGCGGCATCTGGCGCGCAGCTTCGACGTGACCATCGCC AGCGCGCAGGCCTTCGAGAAGCATCTCTCCGACCATTATGCGATGGAAGGCTCGGCCGCCGCCATGGCCGGATCGCTGGC CATGGGCGGGGACGATCTCGATTTCATCGCCGGCGACCTGCCGACCGCCGAGGACCTGCTGGACAGCGGCGACGACGCGC CCGCCATCCGCCTCATCAACGGCATCATCGCGGAAGCCGCGCGGCAGGGCGTCTCCGACATCCATATCGAGCCCTATGAG ACCGGCCTCGTGGTGCGCATGCGCATGGACGGCGTGCTGCGCGAGACGCTGCGCATGCCGGCCCATGTCGCGCCCGTGGT GGTCAGCCGCGTCAAGGTCATGGCCCGGCTGGACATCGCCGAGCGGCGCGTGCCGCAGGACGGGCGCATCGGCCTGACGC TCGGCGGCAAGATGCTGGACGTGCGCGTCTCCACGCTGCCGAGCCGGGCAGGCGAACGCGTGGTGCTGCGTATTCTGGAC AAGGAGAATGCGGGCATCTCGCTCGATATTCTCGGCCTCACCGGCATCGCCGACTCCGTCTTCCGCAGCGCGCTGGGCGA GCCCAACGGCATCATCCTCGTCACCGGCCCGACCGGCAGCGGCAAGACGACGACGCTTTATGCCGGGCTGCGCCAGCTCA ATGACGGCAGCCGCAACATCCTCACGGTCGAGGACCCGGTGGAATATGCCATCGAAGGTGTCGGGCAGACGCAGGTGAAC GCCAAGGTGGGCCTTTCCTTCGCGGCGGGGCTGCGCGCCATCCTGCGGCAGGACCCGGACGTGGTGATGGTCGGCGAAAT CCGCGACCGGGAGACGGCCGAGATCGCGGTGCAGGCATCGCTCACCGGCCATCTCGTGCTCTCCACCGTGCACACCAATG ATGCGGTGGGCGCGATCACGCGCATGCGCGACATGAAAGTGGAGCCCTTCCTGCTCGCTTCCACCCTGCGCGCGGTGATC GCGCAGCGGCTGGTGCGGCGGCTGTGCCCCCATTGCCGCGAACAGGTGCAGGCGGACAAGTCGGTCAGCGCGCTGCTCGG CATCGACGAAGGCGCGCTCATCTACCGTCCGCGCGGTTGCGAGCACTGCACCGGCAGCGGCTACAAGGGCCGCGTCGGCG TGTTCGAGGCGATCCGCGTCGACGACACCATCCGCCGGATGATCAACGAGGGCGGCGATGAATCGCTGATCGCTCGCCAT GCCTTCCTCCATGCGCCCAATCTCGTCTCCTCGGCGCGGGCGCTGGTGCTGGGCGGCGAGACGAGCGCGGAGGAAGCGAT CCGGATCTCGCGCCGCGAAACGATCGATGCCTGA Protein sequence : MIDPSRNDPEVPPGEGPDRAVLPIDIPYGFARRHGVVITSLATGDDPAERITIALREGADPRVLVEVRRHLARSFDVTIA SAQAFEKHLSDHYAMEGSAAAMAGSLAMGGDDLDFIAGDLPTAEDLLDSGDDAPAIRLINGIIAEAARQGVSDIHIEPYE TGLVVRMRMDGVLRETLRMPAHVAPVVVSRVKVMARLDIAERRVPQDGRIGLTLGGKMLDVRVSTLPSRAGERVVLRILD KENAGISLDILGLTGIADSVFRSALGEPNGIILVTGPTGSGKTTTLYAGLRQLNDGSRNILTVEDPVEYAIEGVGQTQVN AKVGLSFAAGLRAILRQDPDVVMVGEIRDRETAEIAVQASLTGHLVLSTVHTNDAVGAITRMRDMKVEPFLLASTLRAVI AQRLVRRLCPHCREQVQADKSVSALLGIDEGALIYRPRGCEHCTGSGYKGRVGVFEAIRVDDTIRRMINEGGDESLIARH AFLHAPNLVSSARALVLGGETSAEEAIRISRRETIDA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspE | YP_854406.1 | type II secretion protein GspE | Not tested | PAI I APEC-O1 | Protein | 4e-115 | 53 |
| gspE | CAE85233.1 | GspE, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 3e-115 | 53 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| gspE | YP_004834508.1 | general secretion pathway protein E | VFG2048 | Protein | 9e-117 | 53 |
| gspE | YP_004834508.1 | general secretion pathway protein E | VFG0182 | Protein | 1e-115 | 53 |
| gspE | YP_004834508.1 | general secretion pathway protein E | VFG1876 | Protein | 1e-116 | 50 |
| gspE | YP_004834508.1 | general secretion pathway protein E | VFG0112 | Protein | 3e-82 | 45 |
