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Name : gabD (SLG_12190) Accession : YP_004834351.1 Strain : Sphingobium sp. SYK-6 Genome accession: NC_015976 Putative virulence/resistance : Unknown Product : succinate-semialdehyde dehydrogenase Function : - COG functional category : C : Energy production and conversion COG ID : COG1012 EC number : - Position : 1324927 - 1326390 bp Length : 1464 bp Strand : + Note : - DNA sequence : GTGGATCAAAGTCAGCGCAACGCCGTCATCGCCTACAAGCCTCTTCTCCGCGCCGCCGCTTATGTCGATGGCCAATGGGT GGACGGCGCGGCCGGCCGGACGATCGAGGTCACCGATCCGTTCACCGGCGGCCTCATCACCACCATTCCCGCGCTCGAGC AGGCGCAGGTGCAGGCAGCGATCGATGCCGCCGCGCGCGCGTTCCCGGCATGGGCGCGCACCCCGGCGCGCGAGCGCGGC AAGATCCTGCGCCGGCTGCTGGATCTCATCATGGCCCATCGCGACGATCTCGCGCGGCTCATCACGCTGGAGAATGGCAA GCCGCTCAAGGAAGCTTATGGCGAGGTCGATTATGGCGCCGGCTTCGTCGAGGTCTATGCCGAGGAAGCGCCGCGCGCGC TGGGCGAGATCATTCCCGCGCCGGTGCCGGGGCGCAAGCTCTATGCTGAGCGCGAGCCGGTCGGCGTCAGCGTGGCGATC ACGCCCTGGAACTTCCCGCTGGCGATGCTGACGCGCAAGTTCGCGCCCGCGCTCGCGGCGGGCTGCACGATGGTCGCCAA GCCTGCCAGCCAGACGCCGCTTGCCGCACTCGCGCTGGCCCAGCTCGCCGAGGAAGCGGGCGTGCCGCCGGGCGTGTTCA GCGTCGTCACCGGCAGCGCGGGCATGATCGGGGACCTGTTCACCTCATCGCCCATCGTGCGCAAGCTGAGCTTCACGGGG TCGACCGAGGTCGGCGTGAAGCTGATGGCGGCCTGCGCGCCCACGGTGAAGCGGCTCTCCATGGAGCTGGGCGGCAACGC GCCGATGCTGATCTTCGACGATGCCGATCTCGCCACCGCCGTCGATGCGGCGATGATCGCCAAGTTCCGCAATTGCGGCC AGAGCTGCATCGCGGCCAATCGCATCTATGTGCAGAGGGGCATTTACGACGCGTTCGTGGAGAGCTTCGCGCAGCGCGTG GCCGCCATGAAGCTGGGTGACGGGCTGGAGGAGGACACGGACATCGGTCCGCTCATCGACGCGCCGGCCGTCGCCAAGGT CAACGAACATCTCGAGGATGCGCTTTCCGGCGGGGGGCGGCTGCTGGTTGGCGGCAAGGGCGAGGGGCGGATGCAGCCGC CGACGCTGGTCGTCGATGTCGCGCCCGGCGCCCTGCTCACGCGCGAGGAGACATTCGGTCCGCTGGCCGGCCTCGTCGCC TTCGATGGCTATGAGGATGCGATCCGCCTCGCCAATGATACGCCGTTCGGGCTCGCTTCCTATGTCTGCTCGACCAGCTC CACGACCATCGCGCATGCCAGCCGCGACATCGAAAGCGGCATGGTCGGCGTGAACACCGGCCTCATCTCGACGCCTTATG CGCCGTTCGGCGGCGTCAAGCTGTCGGGCATCGGCAAGGAGGGCTCCTCGCATGGCCTCGATGAGTATCTGAACATCAAA TATGTCTGCCACGCCGGCCTTTGA Protein sequence : MDQSQRNAVIAYKPLLRAAAYVDGQWVDGAAGRTIEVTDPFTGGLITTIPALEQAQVQAAIDAAARAFPAWARTPARERG KILRRLLDLIMAHRDDLARLITLENGKPLKEAYGEVDYGAGFVEVYAEEAPRALGEIIPAPVPGRKLYAEREPVGVSVAI TPWNFPLAMLTRKFAPALAAGCTMVAKPASQTPLAALALAQLAEEAGVPPGVFSVVTGSAGMIGDLFTSSPIVRKLSFTG STEVGVKLMAACAPTVKRLSMELGGNAPMLIFDDADLATAVDAAMIAKFRNCGQSCIAANRIYVQRGIYDAFVESFAQRV AAMKLGDGLEEDTDIGPLIDAPAVAKVNEHLEDALSGGGRLLVGGKGEGRMQPPTLVVDVAPGALLTREETFGPLAGLVA FDGYEDAIRLANDTPFGLASYVCSTSSTTIAHASRDIESGMVGVNTGLISTPYAPFGGVKLSGIGKEGSSHGLDEYLNIK YVCHAGL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| orf17 | AAO17183.1 | Orf17 | Not tested | tcd island | Protein | 1e-97 | 53 |
| cur_1509 | YP_001800903.1 | NAD-dependent aldehyde dehydrogenase | Not tested | Not named | Protein | 2e-64 | 41 |
