Gene Information

Name : glnA (SLG_12030)
Accession : YP_004834335.1
Strain : Sphingobium sp. SYK-6
Genome accession: NC_015976
Putative virulence/resistance : Virulence
Product : glutamine synthetase
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG0174
EC number : -
Position : 1305407 - 1306819 bp
Length : 1413 bp
Strand : -
Note : -

DNA sequence :
ATGGCCAACACGCCCAAAGACATTCTCAAGATGATCGAGGAGAAGGAGATCGAGTGGGTCGATCTGCGCTTCACCGATCC
GAAGGGCAAGTGGCAGCACTTGACCATGTGCTCCGGCGTCCTCGGCGAGGATGAGCTGGAAGAAGGCCTGATGTTCGACG
GCAGCTCCATCGAGGGCTGGAAAGCGATCAACGAGTCGGACATGATCCTCAAGCCCGACCTCGACGCCGTCTATGTCGAT
CCGTTCAGCGCGACGCCGATGCTGATCCTGTTCTGCAACATCGTCGAGCCCTCCACCGGCGAGCTCTACGGCCGCGACCC
GCGCTCGACCGCCGTGCGCGCCGAGGCGTATGTGAAGGCCGCCGGTTTCGGCGACACCGTCTATGTCGGCCCGGAAGCCG
AGTTCTTCATGTTCGACGATGTCCGCTTCAACAACGACTACAACGAGTCCTACTACAAGATCGACGATGTCGAGCTGCCG
ACCAACACCGGCAAGGAATATGAGGGCGGCAATCTCGGCCACCGTCCGCGCGCAAAGGGCGGCTACTTCCCCGTCGCGCC
GGTCGATCCCTGCACGGACATCCGCGCCGAGATGGTCACCACCATGCTGGAAATGGGACTCCCCTGCGACAAGCACCACC
ATGAGGTGGCCGCCGCGCAGCACGAGCTGGGCCTCACCTTCGGCACGCTGGTCCAGACTGCCGACCGCATGCAGATCTAC
AAATATGTCGTGATGATGGTCGCTCAGGCCTATGGCAAGACGGCGACCTTCATGCCCAAGCCGATCGCGCAGGACAATGG
CTCGGGCATGCACACCCACATCTCGATCTGGGAAGGCAAGGAGCCCAAGTTCGCGGGCAACGGCTATGCCGGCCTCTCCG
ACATGTGCCTCTACTTCATCGGCGGCGTCATCAAGCACGCCAAGGCCCTCAACGCCTTCACCAACCCGACCACCAACAGC
TACAAGCGGCTGGTGCCGGGCTTCGAGGCCCCCGTGCTGCTCGCTTATTCGGCGCGCAACCGCTCGGCTTCCTGCCGCAT
CCCCTACGGGTCGGGCGCCAAGTCCAAGCGCGTCGAGTTCCGCTTCCCGGACGCGATGGCCAACCCCTATCTCTGCTACG
CCGCGCTGCTGATGGCCGGCCTCGACGGCATCGAGAACAAGATCCATCCCGGCGAGGCGATGGACAAGAATCTCTATGAC
CTGCCGCCCGAGGAACTGGCCGAAGTCCCCACCGTCTGCGGCTCGCTCCGCGAGGCACTCAACAGCCTGGAAGCCGACTA
CGAGTTCCTGCTGAAGGGCGACGTGTTCAGCAAGGACCAGATCGAGGCCTATATCGAGCTGAAGTGGCCCGAGGTCTATC
GCTGGGAAATGGCGCCCAGCCCGGTCGAGTTCGACATGTATTACAGCGCCTGA

Protein sequence :
MANTPKDILKMIEEKEIEWVDLRFTDPKGKWQHLTMCSGVLGEDELEEGLMFDGSSIEGWKAINESDMILKPDLDAVYVD
PFSATPMLILFCNIVEPSTGELYGRDPRSTAVRAEAYVKAAGFGDTVYVGPEAEFFMFDDVRFNNDYNESYYKIDDVELP
TNTGKEYEGGNLGHRPRAKGGYFPVAPVDPCTDIRAEMVTTMLEMGLPCDKHHHEVAAAQHELGLTFGTLVQTADRMQIY
KYVVMMVAQAYGKTATFMPKPIAQDNGSGMHTHISIWEGKEPKFAGNGYAGLSDMCLYFIGGVIKHAKALNAFTNPTTNS
YKRLVPGFEAPVLLAYSARNRSASCRIPYGSGAKSKRVEFRFPDAMANPYLCYAALLMAGLDGIENKIHPGEAMDKNLYD
LPPEELAEVPTVCGSLREALNSLEADYEFLLKGDVFSKDQIEAYIELKWPEVYRWEMAPSPVEFDMYYSA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
glnA YP_003728749.1 glutamine synthetase Not tested cag PAI Protein 2e-104 50

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
glnA YP_004834335.1 glutamine synthetase VFG1399 Protein 1e-94 48