Gene Information

Name : SLG_10700 (SLG_10700)
Accession : YP_004834202.1
Strain : Sphingobium sp. SYK-6
Genome accession: NC_015976
Putative virulence/resistance : Unknown
Product : catalase
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG0753
EC number : -
Position : 1130295 - 1131755 bp
Length : 1461 bp
Strand : -
Note : -

DNA sequence :
ATGACCAGCGATAACCAGCCACTCACCCATGCCAGCGGCGCGCCGGTGGCCGACAACATCAATATCCTGACGGCCGGTCC
GCGTGGGCCAGCGCTGCTCGAAGACATCTGGTTGATCGAGAAGCTCGCTCATTTCGACCGCGAGGTGATCCCCGAGCGCC
GCATGCACGCCAAGGGCTCGGGCGCTCATGGGACATTCACGGTGACCAACGACGTGACAGGTTTCACCAAAGCGAAACTC
TTCGCGGAAGTCGGCAAGGAGACGCCCGTCTTCCTGCGCTTCTCGACGGTGGCTGGCGAACGCGGCGCGGCCGATGCCGA
GCGCGACATTCGCGGCTTCGCGGTCAAGTTCTACACGCAGGAGGGCAATTGGGATCTGGTCGGCAACAACACGCCGGTCT
TCTTCTTCCGCGATCCGCTGCGTTTCCCGGATCTTAACCACGCCGTGAAGCGTGACCCGCGCACAGGGTTGCGCAGCGCA
CAGAACAACTGGGATTTCTGGACGCTGCTGCCCGAGGCACTGCATCAGGTGACGATCGTCATGTCGGACCGTGGCATCCC
CGCGAGCTACCGGCATATGCACGGCTTCGGCAGCCACACCTTCAGCCTGATCAACGCGGATAACGAGCGAGTCTGGGTGA
AATTCCATTTCCGCTGCCAGCAGGGCATCGAAAATCTGTCCGACGCGCAATCCGCCGCCGTCATTGGCGGTGATCGGGAA
AGCCATGGCCGCGATCTGTTCGAGGCGATCGAGCGGGGTGATTATCCGCGCTGGACACTCTGCATCCAGGTGATGACCGA
GGCGCAAGCCAGCACTCACAAGCACAATCCGTTCGATCTGACCAAGATATGGCCAAAAGCGGACTATCCGCTGATCGAGG
TCGGCGTGCTGGAACTCAACCGCAATCCCGAGAATGTTTTCGCCGAGGTGGAGCAGGCGGCCTTCTCCCCCGCGAACATC
GTGCCCGGCATCGGCTTCTCGCCGGACAAGATGCTGCAGGCGCGACTTTTCTCCTACGGAGACGCCCAACGCTACCGGCT
CGGCGTCAATCATGCGCACATCCCGGTCAATGCCCCCAAATGCCCGTTCCACAGCTATCATCGCGACGGTGCGATGCGCA
CGGACGGCAATCTCGGCGCAACGCTCAGCTATTATCCGAACGACCAGGCCGTCTGGCGGGACCAGCCGCATCTCCACGAG
CCCGCGCTGCCGATCGACGCCGCCGCCGCGCACTGGGATCATCGCATCGATGACGATCACTGGGAGCAGCCGGGCAATCT
CTTCCGCCTGATGAGCCCGGCCCAGCAGCAGCTTCTGTTCGAGAATACCGCCCGGCAGATCGGCGGCGCGTCCCTCGCCG
TGCAGCAGCGCCATGTCGCCAACTGCCAGCGCGCCGACCCTGCCTATGGCGCCGGCGTCGCCCGGGCGCTTGGCCTCGAT
CTCGCCACCGCCGCCGAATAA

Protein sequence :
MTSDNQPLTHASGAPVADNINILTAGPRGPALLEDIWLIEKLAHFDREVIPERRMHAKGSGAHGTFTVTNDVTGFTKAKL
FAEVGKETPVFLRFSTVAGERGAADAERDIRGFAVKFYTQEGNWDLVGNNTPVFFFRDPLRFPDLNHAVKRDPRTGLRSA
QNNWDFWTLLPEALHQVTIVMSDRGIPASYRHMHGFGSHTFSLINADNERVWVKFHFRCQQGIENLSDAQSAAVIGGDRE
SHGRDLFEAIERGDYPRWTLCIQVMTEAQASTHKHNPFDLTKIWPKADYPLIEVGVLELNRNPENVFAEVEQAAFSPANI
VPGIGFSPDKMLQARLFSYGDAQRYRLGVNHAHIPVNAPKCPFHSYHRDGAMRTDGNLGATLSYYPNDQAVWRDQPHLHE
PALPIDAAAAHWDHRIDDDHWEQPGNLFRLMSPAQQQLLFENTARQIGGASLAVQQRHVANCQRADPAYGAGVARALGLD
LATAAE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
katA ABD94664.1 catalase isozyme A Not tested ExoU island A Protein 5e-161 66
katA YP_005126717.1 catalase Not tested Not named Protein 2e-96 55
katA YP_005682539.1 catalase Not tested PiCp 3 Protein 1e-92 52
katA YP_003782575.1 catalase Not tested PiCp 3 Protein 1e-92 52
katA YP_005684630.1 catalase Not tested PiCp 3 Protein 1e-92 52
katA YP_005680448.1 catalase Not tested PiCp 3 Protein 1e-92 52