Gene Information

Name : SLG_10540 (SLG_10540)
Accession : YP_004834186.1
Strain : Sphingobium sp. SYK-6
Genome accession: NC_015976
Putative virulence/resistance : Unknown
Product : putative integrase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG4973
EC number : -
Position : 1116718 - 1117350 bp
Length : 633 bp
Strand : -
Note : -

DNA sequence :
ATGGGACATTCAGACCTCGACCCCGCCATACATGATCGGCGGCCTTGGAACGCAGGGAAAAATATTGGACCGAAACGCCC
GCTGAAGCCTCGCGATATCTGGGCGATCCGTTTCTATCTCGACGAACACAAACGTCTGCGTGACCGGGCTCTGTTCGATC
TCGCCATCGACAGCAAATTGCGAGGCTGCGATCTGGTCAAAATCAAGATCGGCGACCTGATCAGCGCGGGGTCATTTCGG
GATCGCGCGACCGTTATCCAGCAAAAGACCAATCGACCCGTGCAGTTCGAAATCATGACTGAGGCACGCAAGAGCCTCAA
GACTTGGCTCGACCGGCGCGGCGGCACAATCCGAGACTTCGTGTTCCCCAGCAGGATCGATTACCTTGGTCACTTGAGCA
CACGACAATATGCTCGCCTTGTCGACGAATGGGTATCGACGATCGGCCTCGACAACCGAGAATATGGCACACACTCGATG
CGACGGACCAAGGCGGCACTGATCTACAAGGCAACGGGTAATCTTCGCGCCGTGCAAATCCTGCTCGGCCATACCAACAT
CGAAAATACCGTCAGATACCTCGGTGTAGATATCGACGATGCACTGACGCTGTCCGAACGGACCGAAATTTGA

Protein sequence :
MGHSDLDPAIHDRRPWNAGKNIGPKRPLKPRDIWAIRFYLDEHKRLRDRALFDLAIDSKLRGCDLVKIKIGDLISAGSFR
DRATVIQQKTNRPVQFEIMTEARKSLKTWLDRRGGTIRDFVFPSRIDYLGHLSTRQYARLVDEWVSTIGLDNREYGTHSM
RRTKAALIYKATGNLRAVQILLGHTNIENTVRYLGVDIDDALTLSERTEI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAL67363.1 putative recombinase Not tested PAI II CFT073 Protein 3e-47 50