Gene Information

Name : ssb (LRC_00090)
Accession : YP_004831279.1
Strain : Lactobacillus ruminis ATCC 27782
Genome accession: NC_015975
Putative virulence/resistance : Unknown
Product : ssDNA-binding protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG0629
EC number : -
Position : 9895 - 10440 bp
Length : 546 bp
Strand : +
Note : -

DNA sequence : 
ATGATCAATAGAGTTGTTTTGGTTGGTCGTTTGACCAGAGACCCTGATTTGCGCTACACGAATTCAGGTACTTCAGTGGC
CAGTTTCACTGTTGCCGTCGATCGAAACTTCACTAACCAACAGGGTAATCGTGAAGCAGATTTTATCAATTGTGTAGTAT
GGGGCAAATCCGCAGAGAATTTTGCCAACTTCACGCATAAGGGTTCGCTTGTCGGAATTGAAGGGCGCATCCAAACGCGT
TCTTACGAAAATCAGCAAGGGAATCGCGTGTATGTGACTGAAGTCGTTACGGAAAACTTCTCGTTGCTCGAATCCAAGGC
AGAATCTGATCGTTACCGCGCACAGCACGGTGGTTCGGCATCATCTGCTCCTCGTCAACAGAGTCAGTCTTCGTTCGGTG
GAAATCCTTACGGAGCTCCTACCAACAATCAGGGCAGTTATCAGCAAGATAACGCCTATGGCAACGGGAATAACGATGCC
ATGCAGGATCCGTTTGCCGGCAACGGCTCCAAGACGGATATTTCAGAAGACGACTTGCCATTCTAA

Protein sequence : 
MINRVVLVGRLTRDPDLRYTNSGTSVASFTVAVDRNFTNQQGNREADFINCVVWGKSAENFANFTHKGSLVGIEGRIQTR
SYENQQGNRVYVTEVVTENFSLLESKAESDRYRAQHGGSASSAPRQQSQSSFGGNPYGAPTNNQGSYQQDNAYGNGNNDA
MQDPFAGNGSKTDISEDDLPF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ssb-2 NP_814280.1 single-strand binding protein Not tested Not named Protein 1e-37 49
ef0020 AAM75226.1 EF0020 Not tested Not named Protein 7e-38 49
SAKOR_01963 YP_008492151.1 Single-strand DNA binding protein Not tested ¥ÕSa3 Protein 2e-31 44
MW1921 NP_646738.1 single-strand DNA-binding protein Not tested ¥ÕSa3 Protein 8e-31 44
SAV1983 NP_372507.1 single-strand DNA-binding protein Not tested ¥ÕSa3 Protein 3e-31 44
SA1792 NP_375091.1 single-strand DNA-binding protein Not tested ¥ÕSa3 Protein 3e-31 44
SAUSA300_1958 YP_494609.1 single-strand binding protein Not tested ¥ÕSa3 Protein 4e-31 43
SAUSA300_1958 YP_494609.1 single-strand binding protein Not tested ¥ÕSa3 Protein 4e-31 43