Gene Information

Name : LRC_08170 (LRC_08170)
Accession : YP_004832035.1
Strain : Lactobacillus ruminis ATCC 27782
Genome accession: NC_015975
Putative virulence/resistance : Virulence
Product : pyruvate kinase
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG0469
EC number : -
Position : 870138 - 871898 bp
Length : 1761 bp
Strand : +
Note : -

DNA sequence :
ATGAAAAAGACCAAGATCGTAAGTACACTTGGACCAGCTAGTTCAGATTTGGATACAATTTGCAAGTTGATTGAAGCAGG
TGCTAACGTATTCCGTTTCAACTTCTCACATGGTGACCATGAAGAACATTTGGGTCGTATCAATCTTGTACATCAAGCTG
AAAAGATCACAGGCAAGATGGTTGGTATCATGCTTGATACTAAAGGTGCCGAAATTCGTACGACTGTACAAAAAGAAGGC
AAGATCAAGTTTGAAATCGGTGATGAAGTACGTATTTCCATGGATGATTCCATCGAAGGCACGCATGAAAAGATTGCCGT
AACATACCCAGGCTTGTATGATGACGTTCATGAAGGCGGCCATGTTCTTTTTGATGACGGCTTGATTGACATGCAAGTTG
AAAAGAAAGACGAAGCAAACCATGAATTGTTATGTAAAGTTTTGAACGAAGGTGTTCTTGGTTCACGCAAGGGTGTCAAT
GCTCCTGGCGTTTCCATCAACCTTCCTGGCATTACGAAAAAAGATGCTGATGATATTCGTTTCGGCTTGGACAACGAAAT
CAACTTCATCGCTGCATCATTCGTACGTAAGCCGCAAGACGTTCTCGACATTCGTGAACTTTTGGAAGAAAAGCACATGG
AACATGTTCAAATCTTCCCTAAGATCGAATCACAAGAAGGTATCGACAACATCGACGATATCCTCAAGGTTTCTGATGGT
TTGATGATTGCTCGTGGTGACATGGGTGTTGAAATTCCTGCAGAAAACGTTCCTTTGGTACAAAAAGCTTTGATTAAGAA
GTGCAATGCTTTGGGCATGCCTGTCATCACGGCTACGCAAATGCTTGATTCAATGCAAGAAAACCCACGTCCTACACGTG
CTGAAGCTTCTGACGTTGCTAATGCCGTATTCGACGGCACGGATGCAACGATGCTTTCCGGCGAATCCGCAAACGGTGAC
TACCCTGTTGAAGCTGTTGCAACGATGGCTCGTATCGACGTTAAGGCTGAAAACGCATTGCGTCAACACAAGACATTTGC
TTTGAACGACTTTGACAAGACGGACGTTACGGAAGCAATCGGTCGTGCCGTTGCTGAAGCAGCCGACAACTTGAACATCA
AGACAATCGTTGCTGCAACGAAGTCTGGTCATACGGCACGAATGATTTCCAAGTACCGTCCTGATGCAGACATCTTGGCA
GTTACGTTCGATGAACGCACACGTCGCGGCTTGTCCATCAACTGGGGCGTTTACCCTGTTGTTGCTGAAACACCATCTTC
AACAGATGAAATGTTCAGCTTGGCAACGGAAGAAGCTAAGAAGTGCGGCTTTGCCAAGGAAGGCGATTTGATTCTTATCA
CAGCCGGTGTTCCTGTTGGCGAAAAGGGTACGACAAACGTTATGAAGATTCAATTGATCGGCTCCAAGTTGGTTGAAGGT
CAAGGTGTTGGTGACGAAACGGTTATCGGCAAGACGGTTGTTGCTTCATCAGCTGACGAAGCAAACAAGAAGGCTATTGA
AGGCGGCATCCTTGTTACATCTACGACAGACAAGGATTACTTGCCAGCTATCGAAAAGTCTTCAGCTTTGATCGTTGAAA
ATGGCGGTTTGACATCACATGCTGCCGTTGTCGGCATCTCAATGGGTATTCCTGTCATCGTTGGTGCCAAGAATGCTACA
TCGCTCATCTCTGATGGCGAAGTCGTAACTGTTGACAGCCGTCGCGGTATTGTTTACCATGGTGCATCAAACGCACTTTA
A

Protein sequence :
MKKTKIVSTLGPASSDLDTICKLIEAGANVFRFNFSHGDHEEHLGRINLVHQAEKITGKMVGIMLDTKGAEIRTTVQKEG
KIKFEIGDEVRISMDDSIEGTHEKIAVTYPGLYDDVHEGGHVLFDDGLIDMQVEKKDEANHELLCKVLNEGVLGSRKGVN
APGVSINLPGITKKDADDIRFGLDNEINFIAASFVRKPQDVLDIRELLEEKHMEHVQIFPKIESQEGIDNIDDILKVSDG
LMIARGDMGVEIPAENVPLVQKALIKKCNALGMPVITATQMLDSMQENPRPTRAEASDVANAVFDGTDATMLSGESANGD
YPVEAVATMARIDVKAENALRQHKTFALNDFDKTDVTEAIGRAVAEAADNLNIKTIVAATKSGHTARMISKYRPDADILA
VTFDERTRRGLSINWGVYPVVAETPSSTDEMFSLATEEAKKCGFAKEGDLILITAGVPVGEKGTTNVMKIQLIGSKLVEG
QGVGDETVIGKTVVASSADEANKKAIEGGILVTSTTDKDYLPAIEKSSALIVENGGLTSHAAVVGISMGIPVIVGAKNAT
SLISDGEVVTVDSRRGIVYHGASNAL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY1744 NP_456147.1 pyruvate kinase Not tested SPI-2 Protein 7e-94 48
pykF YP_216386.1 pyruvate kinase Not tested SPI-2 Protein 6e-94 48
pykF NP_805051.1 pyruvate kinase Not tested SPI-2 Protein 6e-94 48
pykF CAA68205.1 pyruvate kinase like protein Not tested SPI-2 Protein 1e-93 48

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
LRC_08170 YP_004832035.1 pyruvate kinase VFG0479 Protein 3e-94 48