|
Name : secA (LRC_06120) Accession : YP_004831844.1 Strain : Lactobacillus ruminis ATCC 27782 Genome accession: NC_015975 Putative virulence/resistance : Unknown Product : protein translocase subunit SecA Function : - COG functional category : U : Intracellular trafficking, secretion and vesicular transport COG ID : COG0653 EC number : - Position : 659976 - 662339 bp Length : 2364 bp Strand : + Note : - DNA sequence : ATGGCTAATATCCTTAAAAAGTGGGTCGAAAGCGACAATCGCGAACTTAAGCGATTGACTAAAATTGCTGATAAAGTAGA GGCCTATGCGCAAGACATGGCTGAGTTGTCAGATGATGATCTTAAGGCAAAAACCCCCGAATTCAAAAAACGTTACCAAG CGGGCGAAACGCTTGACGATCTCTTGCCAGAAGCGTTTGCAGTAGCACGCGAAGGGGCTAAGCGCGTTCTTGGACTTTAT CCTTATCATGTCCAGATTATTGGCGGAATCGTCTTGCACGAAGGCAATATTGCCGAAATGAAGACGGGCGAAGGTAAAAC TTTGACGGCTACGATGCCTGTTTATCTGAATGCTCTTGCAGGCGAAGGCGTTCATGTCGTTACGGTCAACGAATATCTTT CATCGCGTGATGCGACCGAGATGGGGGAACTGTACAATTGGCTCGGACTCAGCGTCGGCTTGAACATTACGGGCAAAACT CCTGAAGAAAAACGCGAAGCATACAATTGCGACATCACCTATTCGACCAACAGCGAACTCGGTTTTGATTATCTTCGCGA CAACATGGTCGTTTATCGTGAAGAGATGGTACAGCGTCCGCTCAATTTCTGCATCGTTGACGAAGTCGATTCCATCTTGA TTGACGAAGCTCGTACTCCATTGATCATTTCGGGCCAGTCATCGGGAACGACGCTTGATTATACGAGAACCGATCGTTTT GCCAAAACGTTGGAGAAGGATACGGATTTTAAGATTGATCTCGAATCAAAGACGGTTTCGTTGACTGAAAAAGGAATTCG CAAAGGCGAACAATATTTTGGCACGCAGAATCTGTTCGACCCTGACAATACGGCGTTGAATCACCACTTGGACAATGCGC TGAGAGCAAACTACATCATGATTCGAGACAAGGATTATGTTGTTCAGGACGGCAAAGTTTTGATTGTTGATCAATTTACG GGCCGTATTATGGACGGCCGCCGTTATTCTGACGGTTTGCACCAGGCCATCGAAGCCAAGGAACACGTTGAAATCGAAGA AGAAACAAAGACGATGGCCAATATCACCTATCAGAACTTCTTCAGAATGTATAAGAAACTTTCCGGCATGACTGGGACGG CTAAGACGGAAGAGGAAGAATTCCGTGAAATTTACAATATGGAAGTTATTTCGATTCCGACGAATAAGCCTGTAATTCGT GACGATCGTCCGGATATTTTGTATCCTAACCTTAAGAGCAAATTTAAGGCCGTGGTTGAAGATATTAAAGAACGTCATGC CAAAGGACAGCCGATTCTTGTCGGAACCGTTGCGGTCGAAACAAGCGAACTTCTTTCAGCGATGCTTGATCAGGCCGGTG TTCCGCATGCTGTTTTGAACGCAAAAAACCATGCCAAAGAAGCTGAAATCATCATGAATGCCGGACAGCGCGGTGCCGTT ACGATTGCAACGAATATGGCCGGGCGCGGTACCGATATCAAGCTTGGGCCGGGAGTCCGTGAACTTGGCGGATTAGCCGT TATCGGGACCGAACGCCATGAGTCGCGTCGTATCGATAATCAGTTGCGCGGTCGTTCAGGACGCCAGGGAGATCCTGGCG TATCTCAATTCTATCTCTCGCTTGAAGACGATTTGATGCTTCGTTTTGGGACGGACAGAGTTAAGCGCTTCTTGGAAACG ATGAATTTGGATGATGAAGATGCCGTGATTCAATCCAAGATGATTACGAAACAAGTCGAGTCTGCTCAAAAGCGCGTTGA AGGCAATAACTACGATATGCGCAAGCAGGTTCTTCAATATGACGATGTCATGAGAGCTCAGCGTGAGGTCATCTATAAGC AGCGTCAGCAAGTCATTATGGAAGAGAAATCATTAAAGCCAGTCATCATGCCGATGATCAAGCGTACGGTTGAGCACGTG GTTCAGATGCATGCGGGCGGCGAACAAAGGGAATGGGATCTTCAAGGAATCGTTGATTTCGCCGTTTCGGCAATGGTTCC TGAAGACAGCATTTCCGTAAGCGATCTTGAAGGTAAGACCGTCGATGAAATGGTTTCGTATTTAATGGATCGTGCCGAAG CAAATTACAAGACGAAGGAAAAGCAGCTTTACGACGCAAGTCAAATGCTTGAATTTGAGAAGGTCGTTATTTTGCGTGTC GTTGACTCGCATTGGACCGATCATATTGACGAAATGGATCAGTTGCGCCAATCGATCGGACTTCGCGGCTATGGTCAGCT GAATCCTCTGGTCGAATACCAATCTGACGGGTTCAAGATGTTTGAACAAATGATTGGCGACATCGAATATGAAGTGACTC GTTTGTTCTTGAAAGCTGAAATTCGTCAAAACATCAAACGTTAA Protein sequence : MANILKKWVESDNRELKRLTKIADKVEAYAQDMAELSDDDLKAKTPEFKKRYQAGETLDDLLPEAFAVAREGAKRVLGLY PYHVQIIGGIVLHEGNIAEMKTGEGKTLTATMPVYLNALAGEGVHVVTVNEYLSSRDATEMGELYNWLGLSVGLNITGKT PEEKREAYNCDITYSTNSELGFDYLRDNMVVYREEMVQRPLNFCIVDEVDSILIDEARTPLIISGQSSGTTLDYTRTDRF AKTLEKDTDFKIDLESKTVSLTEKGIRKGEQYFGTQNLFDPDNTALNHHLDNALRANYIMIRDKDYVVQDGKVLIVDQFT GRIMDGRRYSDGLHQAIEAKEHVEIEEETKTMANITYQNFFRMYKKLSGMTGTAKTEEEEFREIYNMEVISIPTNKPVIR DDRPDILYPNLKSKFKAVVEDIKERHAKGQPILVGTVAVETSELLSAMLDQAGVPHAVLNAKNHAKEAEIIMNAGQRGAV TIATNMAGRGTDIKLGPGVRELGGLAVIGTERHESRRIDNQLRGRSGRQGDPGVSQFYLSLEDDLMLRFGTDRVKRFLET MNLDDEDAVIQSKMITKQVESAQKRVEGNNYDMRKQVLQYDDVMRAQREVIYKQRQQVIMEEKSLKPVIMPMIKRTVEHV VQMHAGGEQREWDLQGIVDFAVSAMVPEDSISVSDLEGKTVDEMVSYLMDRAEANYKTKEKQLYDASQMLEFEKVVILRV VDSHWTDHIDEMDQLRQSIGLRGYGQLNPLVEYQSDGFKMFEQMIGDIEYEVTRLFLKAEIRQNIKR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| secA2 | YP_006310687.1 | preprotein translocase subunit SecA2 | Not tested | FWisland_3 | Protein | 2e-146 | 43 |
