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Name : LRC_05140 (LRC_05140) Accession : YP_004831754.1 Strain : Lactobacillus ruminis ATCC 27782 Genome accession: NC_015975 Putative virulence/resistance : Unknown Product : recombinase/Resolvase Function : - COG functional category : L : Replication, recombination and repair COG ID : COG1961 EC number : - Position : 560826 - 562394 bp Length : 1569 bp Strand : - Note : - DNA sequence : ATGGGTAAAGTGACATTTATCCCCGCAAGACGACAGGTTGGAAACAATATCAAGAAGCAGGAAAAGCCGAAACTACGAGT TGCTGCTTACTGCCGTGTCAGCACAGATTCAGACGAACAGGAAACTAGCTACGAGACACAGGTCAGCCACTACAAGGAGT ATATTCAGAAGAACCCCGAATGGCAGCTCGCCGGCGTATTCGCAGACGATGGTATCTCAGGAACCAACACCAAGAAACGT GACGAATTCAACCGGATGATCAACGAATGCATGGCTGGAAACATCGACATGATCATCACCAAGTCAATCAGCCGATTCGC AAGAAATACCCTTGACTGCCTGAAGTACGTTAGGCAGCTCAAAAACAAGAATATTCCGATCTACTTCGAGAAGGAGTCTA TCAACACAATGGACGCCAAAGGAGAAGTGCTGATTACAATCATGGCGAGTCTGGCACAACAGGAATCGCAGTCTCTCTCT CAGAACGTGAAACTAGGACTTCAATACCGCTACCAGCAAGGAAAAGTGATGGTCAACCATAATCATTTTCTCGGTTACAC GAAGGACGAGAATGGAAACCTAGTCATTGACCCTGTGCAGGCCGAGGTCGTTAAACGAATCTACCGTGAATACCTCGAAG GTTACAGCATGAAGAAGATTTGCCAGCACCTGGAAGCAGATGGAGCTCTCACCGGAGCTGGAAATACGAAATGGTACGAC AGCACGATCAACAAGATCCTTCGAAATGAGAAGTACATGGGCGACGCCCTGCTGCAAAAGACCTATACTACAGACTTCCT GACCAAGAAACGTGTTAAGAATACCGGCATTGTCCCTCAGTATTATGTTGAGAACAACCACGAGGCAATCATACCAAAGG ATATTTTCATGCAAGTGCAGGCTGAACTGGCCCGCCGCCGTAACGTCAGGACCGGCAAATCCGGAAAAAAGCGCTGCTTC TCCGGCAACAATTGTTTCTCCCAGATCGTCTGTTGCGGCCATTGTGGCGAACTCTACCGTCGCATCCACTGGAACAATCA TGGCAAGAAATCCATTGTCTGGCGCTGCATTAGCAGACTAGAACCATCCTTTGCCAAAGAAAACTGCACAAACCGGACTG TACACGAAGAAACCCTCAAGGAAATCTCACTGAAAGCAATCAACCAAATCTGCAACGATAGTGATTCCTTCATCAATCAG ATACAAGAGAACGTTGCAAAAGCAATCGTAAACGCAGATTCTCTTTCACCTGAGGTCATCGATAAACGACTTGAGGAACT ACAAAAAGAGCTCATCCACAAAGTAAACAATAAGCAAGAATACGATGCCATCGCTGATGAGATTTTCCGACTCCGAGATC AGAAACAGCAATCCCTGATGGATGCAGAGACACAGAAAAAAAATCTGAGACGCGTCAAGGATATACAAGACTTCATCAAA GACCAGTCTACAGAGATCACCGAGTTCGACGAGAGCCTCGTCCGAAGATTGGTCGAGAGTATCACTGTCTTCAACGACCA TTTCACAGTGGAATTCAAATCCGGCATTAAAGTCGACATCAACGACTAA Protein sequence : MGKVTFIPARRQVGNNIKKQEKPKLRVAAYCRVSTDSDEQETSYETQVSHYKEYIQKNPEWQLAGVFADDGISGTNTKKR DEFNRMINECMAGNIDMIITKSISRFARNTLDCLKYVRQLKNKNIPIYFEKESINTMDAKGEVLITIMASLAQQESQSLS QNVKLGLQYRYQQGKVMVNHNHFLGYTKDENGNLVIDPVQAEVVKRIYREYLEGYSMKKICQHLEADGALTGAGNTKWYD STINKILRNEKYMGDALLQKTYTTDFLTKKRVKNTGIVPQYYVENNHEAIIPKDIFMQVQAELARRRNVRTGKSGKKRCF SGNNCFSQIVCCGHCGELYRRIHWNNHGKKSIVWRCISRLEPSFAKENCTNRTVHEETLKEISLKAINQICNDSDSFINQ IQENVAKAIVNADSLSPEVIDKRLEELQKELIHKVNNKQEYDAIADEIFRLRDQKQQSLMDAETQKKNLRRVKDIQDFIK DQSTEITEFDESLVRRLVESITVFNDHFTVEFKSGIKVDIND |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| smi_1713 | YP_003446815.1 | site-specific recombinase | Not tested | The aminoglycoside resistance gene cluster | Protein | 2e-163 | 63 |
| SSU05_0953 | YP_001198319.1 | DNA recombinase | Not tested | 89K | Protein | 1e-146 | 59 |
| SSU98_0960 | YP_001200518.1 | DNA recombinase | Not tested | 89K | Protein | 1e-146 | 59 |
