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Name : LRC_04630 (LRC_04630) Accession : YP_004831710.1 Strain : Lactobacillus ruminis ATCC 27782 Genome accession: NC_015975 Putative virulence/resistance : Unknown Product : transposase Function : - COG functional category : L : Replication, recombination and repair COG ID : COG3328 EC number : - Position : 502637 - 503605 bp Length : 969 bp Strand : + Note : - DNA sequence : ATGGCGGAATCCACTGCTCAACTCAAGGCTGAGCCTTACGAACGGTCAGAAGAACGCACGGACAGCCGCAACGGCACTCG AGAACGCGAGCTCAAGACACGGATAGGCAAAATCACCTTAACCGTGCCGAGACATCGCAATGTTCCCTTTAAGACTCTTG TTTTCGAGAACTATTCCCGAAGCGAAGCTGCCTTGATCGCCAGTATGGCGGAGATGGTCGTCAGCGGAGTAGCGACGCGT AAAGTGTCGAATATCATGGAAACTTTGTGCGGAACGACATTTTCTAAGTCCTCAGTTTCAGAAGTATGCAAGGATCTGAT TGAAAAGGTCAATGAGTTCAAGGACAGACCCTTGACCGGAGACTACCCGTTTCTAATAGTGGATGCAACCTACTTCAAGG TCAGGGAAAAACACAGAATTGTTTCCAAAGCGTTTATGATCGCTTACGGTACAAATCAGGAAGGACACCGTGAAATACTC GGATTTGAAGTATATGACAACGAATCCAAAGAAACTTGGAATTCCTTTCTCCAAAAACTGAAAAAACGTGGTCTCCAAGG GCTTTTGATGATCACTTCTGATGCTCATGAAGGTATTCAGGATGCCGTCAGTAAGGTATTTCCTGAGGTTCCATGGCAAA GGTGCCAGTTTCATTTTGCCAGGAACATTTCGGGAAAATCACCAAAAAAATATCAGGCAGGCATCAGAGCCGAACTTCAG GAAATGTGGAACTGCGAAACTATAGAAGATGCACGTAAAAAACGTGATGAAATCATCGCTGATTACAGAGATGTTGCTGA ATCTGCCATGTCATGCCTCGATGAAGGCTTTGAAAGTGCCATGACCGTCATGGCGCTTCCTAAGAATTTGCGGAGATATT TCAGAACATCAAACCATATAGAACGACTGAACAAAGAGCTTAACAACGTTCTTCCGTCATCGGAATCTTCCCAAACGAGA ACTCGCTGA Protein sequence : MAESTAQLKAEPYERSEERTDSRNGTRERELKTRIGKITLTVPRHRNVPFKTLVFENYSRSEAALIASMAEMVVSGVATR KVSNIMETLCGTTFSKSSVSEVCKDLIEKVNEFKDRPLTGDYPFLIVDATYFKVREKHRIVSKAFMIAYGTNQEGHREIL GFEVYDNESKETWNSFLQKLKKRGLQGLLMITSDAHEGIQDAVSKVFPEVPWQRCQFHFARNISGKSPKKYQAGIRAELQ EMWNCETIEDARKKRDEIIADYRDVAESAMSCLDEGFESAMTVMALPKNLRRYFRTSNHIERLNKELNNVLPSSESSQTR TR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | BAC67572.1 | transposase for insertion sequence element IS256 in transposon Tn4001 | Not tested | Type-IVc SCCmec | Protein | 1e-50 | 45 |
| unnamed | BAC67574.1 | transposase for insertion sequence element IS256 in transposon Tn4001 | Not tested | Type-IVc SCCmec | Protein | 1e-50 | 45 |
| EF0529 | NP_814305.1 | IS256, transposase | Not tested | Not named | Protein | 2e-50 | 45 |
| SERP1584 | YP_189149.1 | IS256-like transposase | Not tested | ¥ÕSP¥â | Protein | 2e-50 | 45 |
| SERP1587 | YP_189152.1 | IS256-like transposase | Not tested | ¥ÕSP¥â | Protein | 2e-50 | 45 |
| IS256 | BAC22941.1 | IS256 transposase | Not tested | etd PI | Protein | 1e-50 | 45 |
