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Name : amyA (LRC_04560) Accession : YP_004831704.1 Strain : Lactobacillus ruminis ATCC 27782 Genome accession: NC_015975 Putative virulence/resistance : Unknown Product : alpha-amylase Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG0366 EC number : - Position : 494753 - 496378 bp Length : 1626 bp Strand : + Note : - DNA sequence : ATGGAAAGAAAATGGTGGCAAAAAGTAACCGTATATCAAATTTATCCTCGCAGCTTTCAGGATTCAAATAATGACGGAAT CGGAGATCTGAAAGGAATCATTTCGCGTTTGGACTATCTCGAAAAGCTGGGAATCGGTGCAATCTGGCTTTCACCGGTCT ACAGCTCGCCAAACGATGACAACGGCTATGATATTTCTGATTATAGGAATATTATGAAAGAGTTCGGAACGATGAGCGAC ATGGAAGAATTGATCGATGAAGCAAACAAGCGCGGCATCCGAATCGTGATGGACCTTGTCGTTAATCATACTTCCGATGA ACATTCATGGTTCATCGAAGCTAAAAAATCAAAGGACTCCAAATACCGTGACTATTATATTTGGAGAGATCCGATTGACG GAAGCGAGCCTAATTCGCTTAAATCGTGCTTTGGCGGTTCAGCGTGGCAATATGATGAACAAAGCGGCCAGTATTATCTG CATTTTTTCAGTCCAAAACAGCCTGATTTGAACTGGGAAAATCCTGAAGTAAGAGAAGAAGTCTATGACATGATGAACTT TTGGATCGATAAGGGGATCGGCGGATTCCGCATGGACGTCATTGAAATGATCGGCAAACAGCCTGACAAGATGATTTCAA GCAACGGACCGAAACTTCATGAATACATCAAAGAAATGAATCAAAAAACGTTTGGCAATCATGATTTGTTGACCGTTGGC GAAACATGGGGGGCAACTCCTGACATCGCCAAGCTTTATTCAGATCCTGAACGTAATGAATTAAGCATGATTTTCCAATT TGAAGCAACGACTTTGGATCAGATTGACGGAAAGCCGAAGTGGTTTACGAAACCTTTGGACGTCTTAGGACTTAAGCATG TTTTGTCCAAGTGGCAGACGTGTCTGGAAGATAGAGGATGGAACAGTCTTTTTTGGAACAACCATGATTTGCCAAGAGCA GTTTCCCAATATGGAGATGACGGGATTTATCGCATAGAAAGCGCCAAAATGCTGGCAATCGTCCTACATTTGCTGAAGGG AACGCCGTACGTTTATCAAGGCGAAGAGCTTGGGATGACGAACTGCAAGGTTGAAGACATTTCGGAAGTCGATGACATTG AGAGCCGAAACATGTATTTTGAAGAAATTGAAAAGGGCACTCCAAAAGAAGAATTGATCAACCGCATTAATAGAAAAGGA AGGGACAATGCCAGAACTCCGATGCAATGGGACGGAACTGAAAATGCCGGATTTACCAAAGGAACGCCGTGGCTTCACGT CAACGCCAACTATCACACGATCAATGCCAAAGCGTGCCTGGAAGATGAGAATTCAATTTTTTATACCTATAAGAAACTGA TTGATTATCGAAAGAAAAACGACATCGTGGTTTATGGTGATTATGAGATGGTCGATGATGTCCCGGACGACGTGTTTGTT TATCTGAGAAAATACAGAGGGCAAATGCTTCTTGTCTGTGCAAACTTCACGAACGAATTCAGAAGAATCAATTTAGATAA ATTTGGACGACAAACTTCATTTATTTCTAATTATGATGAAGGCGTAATCGACCTTAGTTCCAAGGTTTTAAAGCCATACG AGGCGTTTGCAATCGAAGTGAAATAA Protein sequence : MERKWWQKVTVYQIYPRSFQDSNNDGIGDLKGIISRLDYLEKLGIGAIWLSPVYSSPNDDNGYDISDYRNIMKEFGTMSD MEELIDEANKRGIRIVMDLVVNHTSDEHSWFIEAKKSKDSKYRDYYIWRDPIDGSEPNSLKSCFGGSAWQYDEQSGQYYL HFFSPKQPDLNWENPEVREEVYDMMNFWIDKGIGGFRMDVIEMIGKQPDKMISSNGPKLHEYIKEMNQKTFGNHDLLTVG ETWGATPDIAKLYSDPERNELSMIFQFEATTLDQIDGKPKWFTKPLDVLGLKHVLSKWQTCLEDRGWNSLFWNNHDLPRA VSQYGDDGIYRIESAKMLAIVLHLLKGTPYVYQGEELGMTNCKVEDISEVDDIESRNMYFEEIEKGTPKEELINRINRKG RDNARTPMQWDGTENAGFTKGTPWLHVNANYHTINAKACLEDENSIFYTYKKLIDYRKKNDIVVYGDYEMVDDVPDDVFV YLRKYRGQMLLVCANFTNEFRRINLDKFGRQTSFISNYDEGVIDLSSKVLKPYEAFAIEVK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| malL | YP_251987.1 | oligosaccharide alpha-1,6-glucosidase | Not tested | SCCmec | Protein | 7e-130 | 52 |
