|
Name : lysS (LRC_03610) Accession : YP_004831615.1 Strain : Lactobacillus ruminis ATCC 27782 Genome accession: NC_015975 Putative virulence/resistance : Virulence Product : lysyl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG1190 EC number : - Position : 384569 - 386059 bp Length : 1491 bp Strand : + Note : - DNA sequence : ATGGCTAATGAACAAACCATGAACGATCAAATGCGCGTTCGTCGCGAAAAGATGCAAGAATTGCGCGACGCAAGCATTGA TCCATTCGGCCATCGTTTTGAACGTGATTCCATGAACCAGGAACTTCATGAGAAGTATGGCGACATGGACAAGGAAGAAT TGAACGACAAGGACATTATCGTAACGATTGCAGGGCGCATGGTTGCCAAACGCGGCAAAGGAAAAGTCGGTTTTGCAGAT CTTCAGGATAAAACCGGCAGAATGCAGCTTTATATCCGCAAAGATGAAGTCGGAGAAGACATGTACCACATCTTTAAGCG TTCTGATCTCGGTGATTTCCTGGGAATTACAGGTCAGGTCATCAAGACTGACATGGGCGAACTGACCGTAAAGGTAACAA AGCTTACTTTCCTTTCGAAGGCGTTGCGTCCGCTTCCTGACAAATATCATGGTTTGCAAGACATTGAACAAATTTATCGT CAGCGCTATCTGGATTTGATTACGAATCGCGAAAGCTACAATCGTTTCGTTAATCGCAGTCGCATCGTGACGGCAATTCG TCGCTATCTTGACGGAAACGGATTCCTTGAAGTTGAAACGCCCGTCCTGCATACACAGGCCGGCGGTGCTTCTGCTCGTC CGTTCATCACTCACCACAATGCGCTCGATATTGAGCTTTATTTGCGCATCGCTCTTGAACTGCATTTGAAACGCCTGATC GTCGGCGGAATGGAACGCGTTTATGAAATCGGACGCGTTTTCCGTAATGAAGGCATCGATACTCATCACAACCCTGAATT TACCATGCTCGAAACATATGCTGCTTATTTCGACTTCAAGGACGTCATGGATGAAACCGAAGGAATCTTCAAGGCTGCCG CAAAGGTCGTTTCCGATAACAGCATCGTGACGTATCAAGGAACGGAAGTCAACTTTGACAAGCCGTTCAAGCGCGCACAT ATGGTTGACCTGATCAAAGAATATACCGGTGTTGATTTCTGGAAGGAAATGACCGTTGAAGAAGCTCGCAAGATTGCGGA CGAACATGGCGTTCATTACGAATCCTATTGGAAAGTCGGTCACATCATCAACGAATTCTTTGAAGAATTCTGTGAAGACA AGATCGTTGATCCGACGTTCGTTTATGGTCATCCTGTCGAAATTTCTCCGCTTGCCAAGAAGAATGCCGATGATCCGCGT TTCACGGATCGTTTCGAACTCTATATTCTTGGCGGCGAATATGCCAATGCTTTCACGGAATTGAACGATCCAATCGATCA GCGTCAGCGTTTTGAAGCCCAGGTCGAAGAGCGCAAGGCCGGAAACGATGAAGCAGAAGGCATCGATGAAGACTATATCG AGGCAATGGAATACGGCATGCCTCCGACAGGCGGTCTTGGCATCGGAATCGACCGTTTGGTCATGCTGTTGACAAATGCA GAGTCGATTCGCGACGTCTTGTTGTTCCCGACAATGAAGACCATCGGATGA Protein sequence : MANEQTMNDQMRVRREKMQELRDASIDPFGHRFERDSMNQELHEKYGDMDKEELNDKDIIVTIAGRMVAKRGKGKVGFAD LQDKTGRMQLYIRKDEVGEDMYHIFKRSDLGDFLGITGQVIKTDMGELTVKVTKLTFLSKALRPLPDKYHGLQDIEQIYR QRYLDLITNRESYNRFVNRSRIVTAIRRYLDGNGFLEVETPVLHTQAGGASARPFITHHNALDIELYLRIALELHLKRLI VGGMERVYEIGRVFRNEGIDTHHNPEFTMLETYAAYFDFKDVMDETEGIFKAAAKVVSDNSIVTYQGTEVNFDKPFKRAH MVDLIKEYTGVDFWKEMTVEEARKIADEHGVHYESYWKVGHIINEFFEEFCEDKIVDPTFVYGHPVEISPLAKKNADDPR FTDRFELYILGGEYANAFTELNDPIDQRQRFEAQVEERKAGNDEAEGIDEDYIEAMEYGMPPTGGLGIGIDRLVMLLTNA ESIRDVLLFPTMKTIG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | CAD66193.1 | putative lysil-tRNA synthetase LysU | Not tested | PAI III 536 | Protein | 2e-116 | 48 |
| lysS | YP_005163386.1 | lysyl-tRNA synthetase | Not tested | Not named | Protein | 4e-87 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| lysS | YP_004831615.1 | lysyl-tRNA synthetase | VFG1668 | Protein | 1e-116 | 48 |
