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Name : serS (LRC_02540) Accession : YP_004831510.1 Strain : Lactobacillus ruminis ATCC 27782 Genome accession: NC_015975 Putative virulence/resistance : Unknown Product : seryl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0172 EC number : - Position : 271914 - 273188 bp Length : 1275 bp Strand : + Note : - DNA sequence : ATGTTAGACATTAAAATGATTCGTCAAAATACTGACGAAATTAAGGAACGTCTCGCAACGCGCGGCGTCAAGGAAGAAAA AATCGACGCTTTGCTTGAAAAAGACAAGCGTCGCCGCGAATTGCTGGTTGAAACGGAAGGACTGAAGCAAAAGCGTAACG AAGTATCTGCAGAAATTGCCAATGCCAAGCGCAATAAGCAGGATGCAACTGACGCAATCAAAGAAATGCGTGAAGTTGGA GCAAAAATCAAGTCTTTGGACGAGGAACTCGAAGAAGTGGAAGCAACGGTCAAGGATATGGCTTCTCGCTTGCCTAACCT GCCGAATCCGACGATTCCGGTCGGTCCAGATGAAAGTGCCAACGTTGAATTGCGCAAAGTAGGCACGCCGCGCGAGTTTG ATTTTGAACCAAAGGCACACTGGGATATCGGTGAAGATCTCGGTATTCTTGATTTTGAACGTGGAGCAAAGGTTTCAGGC GCACGCTTCGTTTACTATAAAGGATTGGGTGCCCGTTTGGAACGCGCCGTTTACAACTTCATGCTTGATGAGCACGCAAA AGAAGGCTATACGGAAATGCTTCCGCCATATATCGTAAATGCTCAGACAATGTACGGAACGGGACAATTCCCTAAGTTCA AAGAAGACGTTTATCAAGTCAACGGAGAAGACATGACGCTGATTCCGACGGCCGAAGTTCCGTTGACGAACTATTACCGC GATGAAGTTATTCCAATGGAAAAGCTTCCGGTATACTTTACTGCGCTTACGCCATGTTTCCGTTCGGAAGCCGGCAGTGC CGGTCGTGATACGCGCGGCTTGATTCGCATGCATCAGTTCAATAAGGTCGAGATGGTCAAGTTTTCAAAGCCCGAAAACT CATATGACGAACTTGAGAAGATGACGCAAAATGCCGGAAACATTATGGAAAAACTTGGTTTGCCATATCATGTAATTACG CTTTCAACCGGCGACATGGGCTTTAGTGCCGCAATGACTCATGACCTTGAAGTCTGGATGCCTGCTCAAAACAAGTATCG CGAAATTTCTTCTTGTTCAAACTGTGAAGATTTCCAAGCGCGCCGTGCCCATATCCAATATCGAGATGAAAACGGCAAAC TGAATTTCGTTCATACTTTAAACGGATCAGGACTCGCCGTTGGTCGTACGGTAGCCGCAATTTTGGAAAACTACCAAAAC GAGGACGGTTCCGTTACGGTTCCGGAAGTACTTCGTCCATACTTGGGCGGTTTGGAAAAGATTACGAAGGATTAA Protein sequence : MLDIKMIRQNTDEIKERLATRGVKEEKIDALLEKDKRRRELLVETEGLKQKRNEVSAEIANAKRNKQDATDAIKEMREVG AKIKSLDEELEEVEATVKDMASRLPNLPNPTIPVGPDESANVELRKVGTPREFDFEPKAHWDIGEDLGILDFERGAKVSG ARFVYYKGLGARLERAVYNFMLDEHAKEGYTEMLPPYIVNAQTMYGTGQFPKFKEDVYQVNGEDMTLIPTAEVPLTNYYR DEVIPMEKLPVYFTALTPCFRSEAGSAGRDTRGLIRMHQFNKVEMVKFSKPENSYDELEKMTQNAGNIMEKLGLPYHVIT LSTGDMGFSAAMTHDLEVWMPAQNKYREISSCSNCEDFQARRAHIQYRDENGKLNFVHTLNGSGLAVGRTVAAILENYQN EDGSVTVPEVLRPYLGGLEKITKD |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| serS | YP_003446791.1 | seryl-tRNA synthetase | Not tested | The aminoglycoside resistance gene cluster | Protein | 3e-144 | 69 |
