Gene Information

Name : LRC_02310 (LRC_02310)
Accession : YP_004831492.1
Strain : Lactobacillus ruminis ATCC 27782
Genome accession: NC_015975
Putative virulence/resistance : Resistance
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 252704 - 253426 bp
Length : 723 bp
Strand : +
Note : -

DNA sequence : 
ATGATCAGGCTTGAAAATATTAATAAATTCTATCGGCAGGGGGATGAGAACTTTCACGTCCTGCATGACATCAATCTTAA
TATCGATCAGGGCGAGTTTGTCGGAATCATGGGGGAATCTGGTTCTGGCAAATCAACTCTGATCAACATCATTGGCTTTT
TGGACGATCAGTTTGAAGGACGTTATGATTTTTATGAGCATCCGATTCATGATTATACGCGGGCGCAATTTTCAAAATTA
CGCAATGAGAACGTGGGGTTCGTTTTCCAAAATTTCAAATTGATCAATACGATTTCGGTTGCGGAAAACGTATCTTTGCC
GCTGCTTTATGCAGGACAGACGCGCAGGTATATCAAAGATCGCGTCAGTGAGGTTCTAGCCCAAGTGGGACTTCAAGGGG
CCGAAAAGAAACTGCCCCAAAATTTGTCCGGCGGGCAGCAGCAGCGCGTTTCGATTGCGCGTGCAATCGTCGCCAAGCCC
AAGTTTTTGATTGCAGATGAACCTACTGGGGCACTCGATTCAAGGACAAGTCAAGAAATTATGAACCTTTTCAAAAAACT
GAACGAGGAGAATCATACGACGATCATTATGGTTACCCACGATCCTAAAGTCGGGGCACAATGCGAGCGATTGGTCAAAA
TCCTTGACGGGCGCATAATTTCTGATGAAGACGGCTTGAATGAGTGGGGAGGAAAAAAGGGAGAAGGGGGCATGAACGCA
TGA

Protein sequence : 
MIRLENINKFYRQGDENFHVLHDINLNIDQGEFVGIMGESGSGKSTLINIIGFLDDQFEGRYDFYEHPIHDYTRAQFSKL
RNENVGFVFQNFKLINTISVAENVSLPLLYAGQTRRYIKDRVSEVLAQVGLQGAEKKLPQNLSGGQQQRVSIARAIVAKP
KFLIADEPTGALDSRTSQEIMNLFKKLNEENHTTIIMVTHDPKVGAQCERLVKILDGRIISDEDGLNEWGGKKGEGGMNA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-34 42
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 4e-35 41
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 4e-35 41
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 4e-35 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
LRC_02310 YP_004831492.1 ABC transporter ATP-binding protein NC_012469.1.7686878. Protein 1e-44 48
LRC_02310 YP_004831492.1 ABC transporter ATP-binding protein NC_008702.1.4606598. Protein 6e-37 43