Gene Information

Name : LRC_17870 (LRC_17870)
Accession : YP_004832954.1
Strain : Lactobacillus ruminis ATCC 27782
Genome accession: NC_015975
Putative virulence/resistance : Unknown
Product : ornithine carbamoyltransferase
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG0078
EC number : -
Position : 1845147 - 1846166 bp
Length : 1020 bp
Strand : -
Note : -

DNA sequence :
ATGAATCATTTTTACGGAAAATCTTATCTGAAAGAAATCGATTTTAACAAAAAAGAACTTGAGTACTTGGTGTATTTTGC
GCTTCATCTAAAGGATCTGAAAAAAAAGAACATTCCGCACAAGTATCTTGAAAACAAGAATATTGCTCTTTTGTTCGAAA
AGACATCGACCAGAACTCGTTCTGCCTTTACCGTTGCAGCCAATGATCTGGGTGCACACCCTGAATTTATGGGCATTTCG
GATACGCAATTCGGCTATAAGGAATCCGTTGCCGATTCTGCTAAAATCTTAGGCAGCATGTTTGACGGCATCGAGTTTCG
CGGCTTTGAACAAGCGACCGTTGAAGGCCTTGCCAAATACAGCGGTGTTCCCGTTTGGAACGGTTTGACGGATGATTGGC
ATCCGACCCAGATGATTGCCGATTTCATGACGATCAAAGAAGTTTTTGGAACGCTCGAAGGCAAAAAACTCACATATGTC
GGAGACGGGCGCAACAATATGGCCAACAGTCTGCTTGTCACGAGCGCGATTCTTGGCATTGACTGCTCAATCGGTGCTCC
TGCTGATTTGCAGCCGGCTAAAGAAGTTCAAGACATTGCGCACAAATTGGCTGAAAAGAGCGGCAGCACGCTCGAAATTA
CGGATGATGTCGAACAGGCAGTCAAGGATGCCGATGTCTTGTATACCGATGTTTGGATCTCCATGGGAGAAGACATTGAC
GTCAAGGCCCGGGTCGAAAAACCCCTGCCGTATCAAATCAACGATTCTCTGCTTGAAAAGACCGGCAAATCCGAGACGGT
CGTGATGCATTGTCTGCCTGCATTCCATGATAAGCAAACCAAAATGGGCAAAAAGCTTTGTGATCAATTTGGTGTCGAGG
CGCTCGAAATTACGGATGACGTCTTCAACGGCAAGCATTCCGTTGTCTTTCAAGAAGGCGAAAATCGGCTTCATTCCATC
AAAGCCATCATGGCAGCAACGTTGGGCGATTTGTTCATCCCTGATTATTTGTTTGAATAA

Protein sequence :
MNHFYGKSYLKEIDFNKKELEYLVYFALHLKDLKKKNIPHKYLENKNIALLFEKTSTRTRSAFTVAANDLGAHPEFMGIS
DTQFGYKESVADSAKILGSMFDGIEFRGFEQATVEGLAKYSGVPVWNGLTDDWHPTQMIADFMTIKEVFGTLEGKKLTYV
GDGRNNMANSLLVTSAILGIDCSIGAPADLQPAKEVQDIAHKLAEKSGSTLEITDDVEQAVKDADVLYTDVWISMGEDID
VKARVEKPLPYQINDSLLEKTGKSETVVMHCLPAFHDKQTKMGKKLCDQFGVEALEITDDVFNGKHSVVFQEGENRLHSI
KAIMAATLGDLFIPDYLFE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SE0103 NP_763658.1 ornithine carbamoyltransferase Not tested SCCpbp4 Protein 3e-77 50
argF NP_645867.1 ornithine carbamoyltransferase Not tested vSa¥ã Protein 6e-78 50
arcB1 YP_186044.1 ornithine carbamoyltransferase Not tested vSa¥ã Protein 5e-78 50
argF YP_493760.1 ornithine carbamoyltransferase Not tested vSa¥ã Protein 5e-78 50
argF NP_371693.1 ornithine carbamoyltransferase Not tested vSa¥ã Protein 4e-78 50
argF NP_374285.1 ornithine carbamoyltransferase Not tested vSa¥ã Protein 4e-78 50
SAKOR_01090 YP_008491278.1 Ornithine carbamoyltransferase Not tested vSa¥ã Protein 5e-78 50