Gene Information

Name : LRC_01740 (LRC_01740)
Accession : YP_004831438.1
Strain : Lactobacillus ruminis ATCC 27782
Genome accession: NC_015975
Putative virulence/resistance : Virulence
Product : Choloylglycine hydrolase
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG3049
EC number : -
Position : 194495 - 195469 bp
Length : 975 bp
Strand : +
Note : -

DNA sequence : 
ATGTGTACAGCAGCAACGTATACTGGCAAAGATCATTATTTTGGTCGCAATCTTGATTTGGAACTCTCCTACAATGAATC
CGTGACGGTTACGCCACGCAAATTTCCTTTAAAGTTTCGTCAAGTACATGATATGAACGAACATTTTGCCATCATCGGGA
TGGCAACGGTGGTCGATGATTATCCGCTTTATTATGATGCAACGAACGAAAAAGGATTGAGTATGGCAGGGTTGAATTTC
CCGGGAAATGCAGATTACAAAGAACCTGCAGAAGATGTCGACAATGTCGCATCCTTTGAACTCATTCCTTGGATTCTCGG
ACAATGCGAGACTGTTGCTGACGTCCGTAAATTGCTTGCAAAAATCAATATTACGAACGTTGAATTCAGTGAACAATTCC
CGCCGAGTCCATTGCACTGGATGATTTCCGATAAGAATGAGTCGATTACGGTTGAACAGACGAAGGCGGGACTTAATGTC
TATGACAACCCGGTCGGCATAATGACGAACAACCCTGAATTTCCATTCCAGATGTTTACGTTGAACAACTATCGCCGCGT
TTCTCCAAAACCGGTCGCATCAACGTTTGCAGATGGCCTTGAACTCGATGAATATACTCGCGGAATGGGCAGCATGGGAC
TGCCGGGAGATCTTTCATCCAACTCGCGTTTCGTTAAAGCAACGTTCACGAAGCTCAATGCGCCGAAGATGGCTGATGAA
AACACGAGCGTCAGTCAATTCTTCCACATTCTCGGTTCCGTTGAACAACAGAAGGGATGCTGCGACGTTGGCAACGGCAA
ATTTGAATTCACGATTTATTCTTCATGCTGCAACGTCGATCGCGGAATCTACTACTATAGGACTTATGACAACAGCCAAA
TCACGGCAGTAGACATGCACAAGGAAGACCTTGATTCAGCAGCTTTGAAATCATATAAGCTGATTGAAGAACAACAAATC
TTTGCGCAAAACTAA

Protein sequence : 
MCTAATYTGKDHYFGRNLDLELSYNESVTVTPRKFPLKFRQVHDMNEHFAIIGMATVVDDYPLYYDATNEKGLSMAGLNF
PGNADYKEPAEDVDNVASFELIPWILGQCETVADVRKLLAKINITNVEFSEQFPPSPLHWMISDKNESITVEQTKAGLNV
YDNPVGIMTNNPEFPFQMFTLNNYRRVSPKPVASTFADGLELDEYTRGMGSMGLPGDLSSNSRFVKATFTKLNAPKMADE
NTSVSQFFHILGSVEQQKGCCDVGNGKFEFTIYSSCCNVDRGIYYYRTYDNSQITAVDMHKEDLDSAALKSYKLIEEQQI
FAQN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
EF0521 NP_814299.1 choloylglycine hydrolase Not tested Not named Protein 4e-104 64
ef0040 AAM75246.1 EF0040 Not tested Not named Protein 3e-104 64

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
LRC_01740 YP_004831438.1 Choloylglycine hydrolase VFG2162 Protein 6e-109 65