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Name : fliQ (LRC_15960) Accession : YP_004832776.1 Strain : Lactobacillus ruminis ATCC 27782 Genome accession: NC_015975 Putative virulence/resistance : Virulence Product : flagellar biosynthesis protein FliQ Function : - COG functional category : N : Cell motility COG ID : COG1987 EC number : - Position : 1652033 - 1652296 bp Length : 264 bp Strand : - Note : - DNA sequence : ATGAGTATTGAAGTCGTAACAGATGTGATGCGTGACGCGTTGATTCGCGTTTTGATCGTCTCGGCACCTGTCATTTTAGT TGCAATGATCGTCGGCTTGATCATCAGTATTTTTCAGGCAACAACGCAGATTCAGGAACAGACGTTGAGTTTTGTTCCCA AGCTTGCAGCAATCTTCGTCACGCTGATTATAGCGGGAAATTTCATGATTAACATTTTGCTTGAATTTACTCGGCATATT TTCAGAATGATCAGCAACTTGTGA Protein sequence : MSIEVVTDVMRDALIRVLIVSAPVILVAMIVGLIISIFQATTQIQEQTLSFVPKLAAIFVTLIIAGNFMINILLEFTRHI FRMISNL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ssaS | YP_216428.1 | secretion system apparatus protein SsaS | Virulence | SPI-2 | Protein | 2e-05 | 54 |
| ssaS | NP_460385.1 | type III secretion system apparatus protein | Virulence | SPI-2 | Protein | 2e-05 | 54 |
| ssaS | CAA68200.1 | secretion system apparatus, SsaS | Virulence | SPI-2 | Protein | 1e-05 | 54 |
| ssaS | NP_456108.1 | putative type III secretion protein | Virulence | SPI-2 | Protein | 2e-05 | 54 |
| ssaS | NP_805091.1 | type III secretion protein | Virulence | SPI-2 | Protein | 2e-05 | 54 |
| lscS | AAO18039.1 | LscS | Virulence | TTSS locus | Protein | 1e-06 | 46 |
| hrcS | AAB06006.1 | HrcS | Virulence | Hrp PAI | Protein | 7e-10 | 41 |
| ysaS | AAS66847.1 | YsaS | Not tested | SSR-1 | Protein | 2e-05 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| fliQ | YP_004832776.1 | flagellar biosynthesis protein FliQ | VFG0520 | Protein | 5e-06 | 54 |
| fliQ | YP_004832776.1 | flagellar biosynthesis protein FliQ | VFG0395 | Protein | 2e-07 | 50 |
| fliQ | YP_004832776.1 | flagellar biosynthesis protein FliQ | VFG2132 | Protein | 7e-13 | 50 |
| fliQ | YP_004832776.1 | flagellar biosynthesis protein FliQ | VFG0043 | Protein | 2e-07 | 44 |
| fliQ | YP_004832776.1 | flagellar biosynthesis protein FliQ | VFG2015 | Protein | 6e-10 | 43 |
| fliQ | YP_004832776.1 | flagellar biosynthesis protein FliQ | VFG1260 | Protein | 2e-11 | 42 |
