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Name : LRC_01220 (LRC_01220) Accession : YP_004831388.1 Strain : Lactobacillus ruminis ATCC 27782 Genome accession: NC_015975 Putative virulence/resistance : Unknown Product : transposase Function : - COG functional category : L : Replication, recombination and repair COG ID : COG3328 EC number : - Position : 136245 - 137483 bp Length : 1239 bp Strand : - Note : - DNA sequence : ATGGCTCAATTAAATATTACCTTAAATCAAGAGGAAATTCTACAACTTCTTTCAAAGGATCACGATCAGGCATTTCGCGA ACTGCTGCGTAAAAGTCTCAATAGTATTTTGATGGCGGAATCCACTGCTCAACTCAAGGCTGAGCCTTACGAACGGTCAG AAGAACGCACGGACAGCCGCAACGGCACTCGAGAACGCGAGCTCAAGACACGGATAGGCAAAATCACCTTAACCGTGCCG AGACATCGCAATGTTCCCTTTAAGACTCTTGTTTTCGAGAACTATTCCCGAAGCGAAGCTGCCTTGATCGCCAGTATGGC GGAGATGGTCGTCAGCGGAGTAGCGACGCGTAAAGTGTCGAATATCATGGAAACTTTGTGCGGAACGACATTTTCTAAGT CCTCAGTTTCAGAAGTATGCAAGGATCTGATTGAAAAGGTCAATGAGTTCAAGGACAGACCCTTGACCGGAGACTACCCG TTTCTAATAGTGGATGCAACCTACTTCAAGGTCAGGGAAAAACACAGAATTGTTTCCAAAGCGTTTATGATCGCTTACGG TACAAATCAGGAAGGACACCGTGAAATACTCGGATTTGAAGTATATGACAACGAATCCAAAGAAACTTGGAATTCCTTTC TCCAAAAACTGAAAAAACGTGGTCTCCAAGGACTTTTGATGATCACTTCTGATGCTCATGAAGGTATTCAGGATGCCGTC AGTAAGGTATTTCCTGATGTTCCATGGCAAAGGTGCCAGTTTCATTTTGCCAGAAACATTTCGGGAAAATCACCAAAAAA ATATCAGGCAGGCATCAGAGCCGAACTTCAGGAAATGTGGAACTGCGAAACTATAGAAGACGCACGGAAAAAGCGGGACG AAATCATCGCTGATTACAGAGACGTTGCTGAAGCTGCCATGTCATGCCTCGATGAAGGCTTTGAAAGTTCCATGACCGTC ATGGCGCTTCCTAAGAATTTGCGGAGATATTTCAGAACATCGAACCATATAGAACGACTAAACAAAGAGCTGAAGCGACG TTCTTCCGTCATTGGAATCTTCCCAAATAAAAACTCGCTGATGCGGCTGATGGGTTCCGTTCTGTTGGAAAGAAACGATG TCGTGATCTCCAAGAAAGCCATATTCAGTCCGGTAACCTACGCAAAAATGATCAAGTCCGAGACAGTTGCTGAACTCAAA AAATTGGCAGAGGAACAACAAAAACTAAGAGCTGCGTAA Protein sequence : MAQLNITLNQEEILQLLSKDHDQAFRELLRKSLNSILMAESTAQLKAEPYERSEERTDSRNGTRERELKTRIGKITLTVP RHRNVPFKTLVFENYSRSEAALIASMAEMVVSGVATRKVSNIMETLCGTTFSKSSVSEVCKDLIEKVNEFKDRPLTGDYP FLIVDATYFKVREKHRIVSKAFMIAYGTNQEGHREILGFEVYDNESKETWNSFLQKLKKRGLQGLLMITSDAHEGIQDAV SKVFPDVPWQRCQFHFARNISGKSPKKYQAGIRAELQEMWNCETIEDARKKRDEIIADYRDVAEAAMSCLDEGFESSMTV MALPKNLRRYFRTSNHIERLNKELKRRSSVIGIFPNKNSLMRLMGSVLLERNDVVISKKAIFSPVTYAKMIKSETVAELK KLAEEQQKLRAA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | BAC67572.1 | transposase for insertion sequence element IS256 in transposon Tn4001 | Not tested | Type-IVc SCCmec | Protein | 2e-61 | 43 |
| unnamed | BAC67574.1 | transposase for insertion sequence element IS256 in transposon Tn4001 | Not tested | Type-IVc SCCmec | Protein | 2e-61 | 43 |
| EF0529 | NP_814305.1 | IS256, transposase | Not tested | Not named | Protein | 2e-61 | 43 |
| SERP1584 | YP_189149.1 | IS256-like transposase | Not tested | ¥ÕSP¥â | Protein | 2e-61 | 43 |
| SERP1587 | YP_189152.1 | IS256-like transposase | Not tested | ¥ÕSP¥â | Protein | 2e-61 | 43 |
| IS256 | BAC22941.1 | IS256 transposase | Not tested | etd PI | Protein | 2e-61 | 43 |
