Gene Information

Name : LRC_12100 (LRC_12100)
Accession : YP_004832405.1
Strain : Lactobacillus ruminis ATCC 27782
Genome accession: NC_015975
Putative virulence/resistance : Unknown
Product : ATP-dependent DNA helicase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG1200
EC number : -
Position : 1259474 - 1261507 bp
Length : 2034 bp
Strand : -
Note : -

DNA sequence :
TTGCAAGACAAAGTTTCAAATCTTTCGGGAATCGGTCCGAAAAAGGAATTGGCGCTGAAAGCACTAGGAATTGAAACGAT
TGAGGATCTTTTGTGCTATTACCCATTCAGATATGAGGATATGGCAACAAAAGAAGTTTCAGAACTTGCTGACGGGCAAA
AGGCGGTAATTCAAGGTGTTGTTGCAACCGCTCCGGTCGTCGTTCGTTTCGGCAGGGCCAAAAATCGTCTGAATTTCAAA
CTGTTGGCAGGTCATGACGTCATTCAGATTACCTTCTTTGGACAGGCTTATTTAAAAGACCGGGTTCAGCCGGGCTCAGA
CGTAGCCGTTTACGGAAAATACGATACCGCAAGGCAGAGCATGACTGGAATGAAACTTTTTTCAAATGGAGGGAGTCAAG
AAGATATTGCAGGAGTTTACCGTGCGTCAAAAAAAATCAAAGCTCAAATGATCAAACAGCTGGTTAAAAAAGCATATGAA
GAATATCAGGATGTGGTCGAAGAAATCGTTCCCGAGTCAACGAGACGCAAATTTCGATTGCTCAATCGAAAAAAAATGAT
TCATGACATGCATTTTCCAAAGACGACTCAGGAGTTTGAAATTGCCAGACGATCTGCCATCTTTGACGAGTTTTTCAAGT
ATGAGGCAAGGCTTGCGCTTCTTAAAAAACTTGATCGAAATGACGCCGGTCTATTGATCAAGTACGATAATTCCATGCTC
AAACGTTTTATTTCAGCGCTTCCCTTTGAATTGACAAATGCACAAAAACGCGTCGTGAACGAAATTTGCAGGGACATGCA
TCGTCCTCTTCATATGAATCGACTCTTGCAAGGCGACGTCGGAAGCGGGAAAACGGTAATTGCGGCAATTGCGATGTATG
CTGCAGTTACTGCCGGATTTCAGGCTGCTTTGATGGCTCCGACTGAAATTTTGGCTCAGCAGCATGCCAAAAAACTCAGT
GATTTGTTTCAAGATTTTGGTGTCAGCGTTTGTCTTTTGACGGGAACCGAAGCTTCCAAGACAAAGGTCAAGCATGATAT
CCTGGAAAGACTTGCAAATAAAGAAATCGATATTTTGGTCGGAACTCATGCTTTGATTCAAGATCCGGTCATTTTTAAAA
AGCTGGGGCTTGTCGTTACCGATGAACAGCACCGTTTCGGCGTTAATCAAAGAAAAGCATTGAGAGAAAAAGGTGAAAAT
CCTGACGTTTTGGCAATGACCGCCACCCCGATACCCAGGACGCTTGCAATTACGACGTACGGAGAGATGGACGTTTCCGT
AATCAATGAGCTGCCGAAGGGAAGAAAGCCGATCAGGACTTCCTGGGTTAAGCAAAATCAAATGAATGCGACCCTCGATT
TTGTAGAAAGACAGCTAAAAGACGGGTCACAGGCATATGTCGTTTCGCCTTTGATTGAGGAGTCTGAAGCCGTTGATTTG
AAAAATGCTCAGGAAGTTTTTGAAAAACTTGAAAAAAGATATGCGCCATATTATAAAGTCGGCTTGCTTCATGGTAGAAT
GAAAAGTGACGAAAAAGATGAAATCATGAAAGATTTCAAAGAAGGAAAGTACGATATCTTAGTTTCAACGACCGTGGTTG
AAGTCGGGGTCGATGTTCCGAATGCGACCGTCATGGTGATTCTTGATGCCGATCGTTTTGGCCTGGCACAGCTCCATCAG
CTCAGGGGACGCGTCGGGCGCGGAAGCAAGGCTTCATATTGCATTCTTTGTGCAGATCCCAAGACTGATTACGGAAAAGA
AAGAATGCAGACAATGGTTGAAACGACCGATGGTTTTGTCATTTCGCAAAAAGATCTTGAGTTGCGAGGACCAGGTGAAG
TTCTTGGATCAAGGCAATCAGGACTGCCCGATTTCAGAATTGGCGATCCGGTTGCAAATTTCAATACGCTGCAGGCTGCA
ATGGAAGAAGCGCGTGCGATTATTTTAGACGAAAACTTTGAATATCGAGCAGAAAATGCCGGTTTGATCCGGTATTTGCG
CGCTGTTGTATTGGCTGGCGCAAACTTTGATTAA

Protein sequence :
MQDKVSNLSGIGPKKELALKALGIETIEDLLCYYPFRYEDMATKEVSELADGQKAVIQGVVATAPVVVRFGRAKNRLNFK
LLAGHDVIQITFFGQAYLKDRVQPGSDVAVYGKYDTARQSMTGMKLFSNGGSQEDIAGVYRASKKIKAQMIKQLVKKAYE
EYQDVVEEIVPESTRRKFRLLNRKKMIHDMHFPKTTQEFEIARRSAIFDEFFKYEARLALLKKLDRNDAGLLIKYDNSML
KRFISALPFELTNAQKRVVNEICRDMHRPLHMNRLLQGDVGSGKTVIAAIAMYAAVTAGFQAALMAPTEILAQQHAKKLS
DLFQDFGVSVCLLTGTEASKTKVKHDILERLANKEIDILVGTHALIQDPVIFKKLGLVVTDEQHRFGVNQRKALREKGEN
PDVLAMTATPIPRTLAITTYGEMDVSVINELPKGRKPIRTSWVKQNQMNATLDFVERQLKDGSQAYVVSPLIEESEAVDL
KNAQEVFEKLEKRYAPYYKVGLLHGRMKSDEKDEIMKDFKEGKYDILVSTTVVEVGVDVPNATVMVILDADRFGLAQLHQ
LRGRVGRGSKASYCILCADPKTDYGKERMQTMVETTDGFVISQKDLELRGPGEVLGSRQSGLPDFRIGDPVANFNTLQAA
MEEARAIILDENFEYRAENAGLIRYLRAVVLAGANFD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
recG CAJ77039.1 ATP-dependent DNA helicase Not tested AbaR1 Protein 5e-87 45