Gene Information

Name : LRC_01200 (LRC_01200)
Accession : YP_004831387.1
Strain : Lactobacillus ruminis ATCC 27782
Genome accession: NC_015975
Putative virulence/resistance : Virulence
Product : glycosyltransferase
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG0463
EC number : -
Position : 134451 - 135380 bp
Length : 930 bp
Strand : -
Note : -

DNA sequence :
ATGAAGATATTATCAATTATTGTCCCGTGCTATTACGAAGAAGAAAGTCTTCCTCTGTTTTATAAAGCAACAGAGGAAGT
CAATAAAAAGCTGGAAAATATCAAATTTGAATATTGGTTCATCAATGACGGGTCGACTGACGGAACCTTAGCAGAAATGC
GCAAATTAAACAAACTTAATCCTGAAAACGTGCATTACGTGTCGTTTTCCCGCAACTTTGGCAAGGAAGCCGCACTGTAC
TGCGGTCTTCAGCAGGCAACTGGCAATTATGTGACCGTGATGGACGCTGACCTGCAGGACCCGCCGGAGATGCTACCTGA
AATGATCAAGATCCTCGAAAACGAAGATTATGACTGCGTCGGCACACGCAGGACAACGCGTGAAGGCGAACCACCGATCA
GGTCTTTTTTCGCCAGAATGTTTTACAAAATCATCAATAAGATTTCCGATACCGAAATCGTCGATGGCGCCCGTGATTTT
CGCGTCATGACGCGCCAAATGGTTGATGCGATTCTCGAAATGAGTGAATACAATCGCTTTTCAAAAGGCATCTTCAGCTG
GGTCGGTTTCAATACCAAATATCTTGAATATAAAAATCATGAACGCGTTGCCGGAAAAACAAGCTGGAACTTTTGGAGCT
TATTCAAATATTCAATCGACGGAATCGTCAACTTTTCGCGTTTCCCGCTTGATATCGCATCGTTTATCGGCTTCATTTCG
GCCTTGATTTCGGGATGTGCCATCCTTTTCATCGTTATCCGCTACATGATTCATGGCGATCCGACAAGCGGTTGGGCTTC
CATGGTCTGCATCATGCTGTTTATCGGCGGAATCCAGCTCTTTTGCTTAGGAATCGTTGGCAAGTACATCGGCAAAATCT
TCACTGAGGTCAAGCACCGACCTATTTATATCGTAAAAGAAAAGAAATAA

Protein sequence :
MKILSIIVPCYYEEESLPLFYKATEEVNKKLENIKFEYWFINDGSTDGTLAEMRKLNKLNPENVHYVSFSRNFGKEAALY
CGLQQATGNYVTVMDADLQDPPEMLPEMIKILENEDYDCVGTRRTTREGEPPIRSFFARMFYKIINKISDTEIVDGARDF
RVMTRQMVDAILEMSEYNRFSKGIFSWVGFNTKYLEYKNHERVAGKTSWNFWSLFKYSIDGIVNFSRFPLDIASFIGFIS
ALISGCAILFIVIRYMIHGDPTSGWASMVCIMLFIGGIQLFCLGIVGKYIGKIFTEVKHRPIYIVKEKK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ESA_03027 YP_001439092.1 hypothetical protein Not tested Not named Protein 2e-51 42
gtrBI AAF09026.1 GtrBI Not tested SHI-O Protein 8e-48 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
LRC_01200 YP_004831387.1 glycosyltransferase VFG0670 Protein 5e-49 42