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Name : Entas_3848 (Entas_3848) Accession : YP_004830343.1 Strain : Enterobacter asburiae LF7a Genome accession: NC_015968 Putative virulence/resistance : Unknown Product : type VI secretion protein IcmF Function : - COG functional category : S : Function unknown COG ID : COG3523 EC number : - Position : 4135929 - 4139588 bp Length : 3660 bp Strand : - Note : KEGG: ypy:YPK_0399 type VI secretion protein IcmF; TIGRFAM: Type VI secretion system, IcmF; PFAM: ImcF-related; Protein of unknown function DUF1215 DNA sequence : ATGTATTTTATAAATAAAATCGCCAGCTGGCTGTCTCCATTGCGGGCAATGAAGGTATTCGCAGGCAAATTATTACAACT TAAACCTCTGTTACCCCGTTTTTCATTGTCTTTGACGTTACTCTGGTTGATATGGGGAATGGGGCTGCTTGCCATTTGGT TATGGGGGCCTCTGTGGACATGGGGAGAAATAAAACCGCTGGGATCGGCAGGCAATCGCATTGTGGCAACGTTGCTTCTT TTGCTGCTGGGGCTGAGTGCCGTCAGTTGGTATCTCTATAAACAAGTGCAGCGTGCCTTACCCGGTCAACAGGCAGCAGA AAACCTGCCTTATCAGGCGAGTATCGACCATCAGGCGCGTTTTCTTGATGAATGGCTGCAGCACTATTCCCAGCGTAGCC ACCTCAAAAATGCCATGTACAGCCGCCCCTGGTACATGATGATAGGGGAGAGTATCAGTGGCAAAAGTACCCTGATCCGC AAATCCGATCAGGTTATTCCGCTCAACTTCCAGAGTGAGCTGAAGCGAGAGATGTCCGATGGCAAAGCGCTTAAATCGCT GGGGCTGTTCTTGACCCAGTCTGCTGTTCTGATCGATCCTCCCGGGGAATTCTTCCAGCAAGATGAACACGATAAAGACA AAGAGCACCATCGGGGCAGGCGATTACTGCAGCATCTTCTGGACTGGTTAATCACGCATCGTCCTCGCCAGCCGCTTAAT GGTGTGGTTTTAACGATTAACATCCAGGAATTGATGGCGATGACGGCTGAGAATCGCCGTATGTGGGCGCAACGGTGGCA AACCCAAATTCTGGCGCTAAGCGATCGTTTTGCATGCCGCGTTCCAGTCTATATTGTCATCAATAAAATCGATGTACTGA ATGGTTTTGAGGCGATATATCCTGCTTTATCGCAACAAATGCGCAATAAGACCCTTGGGGTTTCATTCTCTTTAGAAGCG GAACAAGGAGATAGCTGGCGTAAAGAGCTTAAAGTGTTTTGGGAAGAGTGGCAGCAAAATCTAAATCAGCTGATGCCTGA GCAAATGATCAATGGGACCACGATCGATCTCCGCACGGCGTTGTTTTGCTTTATAGGTCAACTTTCTGCGCTGCAAGCAG TGACCGTAGAGACCATCAACGATCTCTTAAGGCATTACAATCGCGATCCGGGCAGACAAATGCTTATCCGTGGCCTCTAT TTTACGTCAGCAATCCAACAAAACAGACGCAGTGACTTCTTCCAGGATGCCATTGCAGAACGGTATGGATTACGTACGAC GACGCAGGGCGTCTGGCAACCAAAAGACAACCAGAGCGGGTATTTTCTTCACGATCTTTTTTCGAACACTCTTTTCTCTG AGCCTAATCTTGCCGGTGAGAACTATGAATTTACGCGCTTGCGCCGCCATCAGTTAACACTTGCAACGGTCATTGCCGGT GGGGTTGCATTGTCGCTGCTCAGTGGCTGGTATTATTACTATCTCAAGAATTATCGCGCAGGTGAGATAGCCCTTAAAAA AGTCGAAACCTTTCAGAAAATCGGCTCGCCTGATGTCAGTAAGCCCCTCGGTGCCGACTGGTTACCGCACATGGATATTA TTCGTGACGCTACCCTGTCTTATGGCGATTACCATGAGAAAAACTCGCTGTTTTCAGATATGGGGTTATATCAGGGAGAC AGAATTGGACAACTGGTTGAAAAGACCTATCTCCGTTTTCTGACGCAGCGTTTTTTGCCGCAGCTCATGACCGATCTGCA GAAGCAACTGGAAGCTGCTCCAGATAACAGGGATGAAAAATTAGCGCTACTGCGCATTATGCGCATGCTCGAAGACAAAA GTGGGCGCAGCATTCCGCTTGTTGAAGAGTACATGCGTGGACGGTGGCAAAATGCATTTACCGGGCAGCGAGAGGTGCAG GAGCGGCTGATGCAGCACCTGGACTACGCATTACAGCATACTGACTGGGCGGGAGATCGACGTAAGGGCGATCGCGATGC GATTAAAGCCTGGGAGCCGTTTGTCGGCCATGTCCAAAGTGCCCAGCGCGAACTGAGTAGGCTCCCGTTATACCAGCGTG TTTATCAAAACCTGGGTATTAAGGCTCGGGAGCAACTTCCCCCCGATCTCGATCTTCGCACTGAAATTGGGGCGCAGTTC GATACGGTCTTTGTCGCAGATGAAGAGGCACTGTTGAAAATCCCTCAGTTCTGGACGCGCTATGGCCTGGGGCATTACTT AACCACACAAATGGGTCGGTTGGTCGATATCACTCGGTTAGATGCATGGGTGTTAAAACTGACTGAGCATACTGACTACA GTGAAGCGGATAAACGGGAGATCCAGCGTCAGATTACCGATCGCTATGTTGGCGATTATGTTAGCCGCTGGCGCAATGCG CTCACGAATCTCTCTATTCGACCTTTTGCCGACATCTCCGAAGCGACGGATGCGTTAGATGCCGTATTGAATAACGGGCA GCCTATCTGGCGAGCCTTACTGCTGTTAAGGGATAACACGCAAACTCAGCTTCAGGCCGCTATTGTCGATCCTGACATTC CTGTTGCCGGCTCGGCTAAAAAGGAACAAAAGGTTGCGCAGGTGCTCAACATTGCGCAGAAAAATACGCTGGAGCAAATG GAGAATCAGCCCGACTATATATTACTCAACCGTATTGGTCGCTCCTTTACAGAACAGAAAGCACTGGTCGAGCACAGTGA CGATCAGAATGGGCAGTTGCGGCAGGCATACAATGCGCTAACAGCAATGAATGCCGAATTGCATCGCATCAGCAACGCCC CAGAGCCCGGCAAGGCGGCGCTGCTACTGGTGCAAATGCGTTTCCAGCAAAATAATGCCGATACATTCTTCACTGCGAAA CAGATGTCGAGAAACCTCTCTGACCCTCTTGGACGTTGGGTTGGCCAATTGGCAGATAATAGCTGGGAAACCGTGATGGG TCTTGCATTACAATCGCTTGAAAAAGAGTGGTCAGGCAAAGTGGTAACCCCATTCCTTTCACAACTGGCAGACAAATATC CGTTTAACAGAAGAGCGACAAAAGATGTTGCTCTCAGCGATATGGAACGCTTCTTTGCACCGGATGGTGTCATCGACAGT TTCTACAAAGATAACCTGAAAGTGTTTGTTGAGGGACGCGCCAGTGCCGTGGATGGGAAATCGGTGATTCGCCCTGAAAT CGTCAGGTCTCTTCAGCAAGCAGATAAAATACGTTCGATTTTCTTCTCAAAACAAAATGGTTTTAGTATTCAATATGCTA TATCGCCGATAGAGCTTAGTGCTAATAAGCGTCGTGCTGTCCTTAATCTTGATGGTCAATTGATTGATTATACGCAAGGG AACCCTACGACGGCCCATCTTGTCTGGCCAAATGCGATGCGCTCCGGAAATGAAAGTAAAATTACGCTTGTGCCCAATGC GGTGGGAGCATCGCCGCGGAGCATAGGATATTCTGGCCCATGGGCAACTTTCCATATTCTTGATAAAGGCGAATTAACCA GTATTCAGGATGGCAGCTTTGATATCCGCTTCACAGTTGATGGTGGAGCAGTGAGCTATCGTGTTTATATGGATGCATCC GATAATCCATTCGCTGGAGATATATTTAGTCAATTTACATTGATGGATCAACTTTACTGA Protein sequence : MYFINKIASWLSPLRAMKVFAGKLLQLKPLLPRFSLSLTLLWLIWGMGLLAIWLWGPLWTWGEIKPLGSAGNRIVATLLL LLLGLSAVSWYLYKQVQRALPGQQAAENLPYQASIDHQARFLDEWLQHYSQRSHLKNAMYSRPWYMMIGESISGKSTLIR KSDQVIPLNFQSELKREMSDGKALKSLGLFLTQSAVLIDPPGEFFQQDEHDKDKEHHRGRRLLQHLLDWLITHRPRQPLN GVVLTINIQELMAMTAENRRMWAQRWQTQILALSDRFACRVPVYIVINKIDVLNGFEAIYPALSQQMRNKTLGVSFSLEA EQGDSWRKELKVFWEEWQQNLNQLMPEQMINGTTIDLRTALFCFIGQLSALQAVTVETINDLLRHYNRDPGRQMLIRGLY FTSAIQQNRRSDFFQDAIAERYGLRTTTQGVWQPKDNQSGYFLHDLFSNTLFSEPNLAGENYEFTRLRRHQLTLATVIAG GVALSLLSGWYYYYLKNYRAGEIALKKVETFQKIGSPDVSKPLGADWLPHMDIIRDATLSYGDYHEKNSLFSDMGLYQGD RIGQLVEKTYLRFLTQRFLPQLMTDLQKQLEAAPDNRDEKLALLRIMRMLEDKSGRSIPLVEEYMRGRWQNAFTGQREVQ ERLMQHLDYALQHTDWAGDRRKGDRDAIKAWEPFVGHVQSAQRELSRLPLYQRVYQNLGIKAREQLPPDLDLRTEIGAQF DTVFVADEEALLKIPQFWTRYGLGHYLTTQMGRLVDITRLDAWVLKLTEHTDYSEADKREIQRQITDRYVGDYVSRWRNA LTNLSIRPFADISEATDALDAVLNNGQPIWRALLLLRDNTQTQLQAAIVDPDIPVAGSAKKEQKVAQVLNIAQKNTLEQM ENQPDYILLNRIGRSFTEQKALVEHSDDQNGQLRQAYNALTAMNAELHRISNAPEPGKAALLLVQMRFQQNNADTFFTAK QMSRNLSDPLGRWVGQLADNSWETVMGLALQSLEKEWSGKVVTPFLSQLADKYPFNRRATKDVALSDMERFFAPDGVIDS FYKDNLKVFVEGRASAVDGKSVIRPEIVRSLQQADKIRSIFFSKQNGFSIQYAISPIELSANKRRAVLNLDGQLIDYTQG NPTTAHLVWPNAMRSGNESKITLVPNAVGASPRSIGYSGPWATFHILDKGELTSIQDGSFDIRFTVDGGAVSYRVYMDAS DNPFAGDIFSQFTLMDQLY |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| pmt1 | AAN64194.1 | Pmt1 | Not tested | macrophage toxin pathogenicity island | Protein | 0.0 | 44 |
| aec30 | AAQ96724.1 | Aec30 | Not tested | AGI-1 | Protein | 0.0 | 41 |
| aec30 | YP_851415.1 | hypothetical protein | Not tested | PAI II APEC-O1 | Protein | 0.0 | 41 |
