Gene Information

Name : Entas_3110 (Entas_3110)
Accession : YP_004829618.1
Strain : Enterobacter asburiae LF7a
Genome accession: NC_015968
Putative virulence/resistance : Unknown
Product : integrase family protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG0582
EC number : -
Position : 3321719 - 3323008 bp
Length : 1290 bp
Strand : +
Note : KEGG: efe:EFER_0816 phage integrase; manually curated; PFAM: Integrase, catalytic core, phage

DNA sequence :
ATGGCACTAAATGAGCTATCACCTAAGAAAGTTGAAAACGCTAAACCCAAAGAAACAGACTACAAACTGACGGATGGGGG
CAGCCTGTATCTTTTAGTTAAAAAGAACGGGACCAAGGCATGGCGAATGAACTACAGATTTAACGGCAAACAAGCTACGC
TGGCTTTGGGTGTTTTCCCAGACGTTTCGCTGGCACTTGCCCGTAAGCGCAGAGATGAAGCAAGGCAACTTTTAGCCGAC
GGTGTTGATCCCAGAGTATCTAAAAGAGCAGCGCCAACAGAACCCTCCTCGGCAACATTCCAGACAATCGCTTTAGAGTG
GCATAAAGGCTCTATAGGTCATCCCTCATGGAAAGAGATTACCCGCATTAAAATTTTAAGAGAAATGGAAAATCATATTT
TCCCATTTATCGGAAATAAACCTATCGATTCATTAAAAACAAGTGATCTGTTGCCATTATTGGTGAGGATGAGTGATCAG
GGAATTGGAGCGACAACAGGAAGAGTGAAAACTACTCTTGCAAGTGTTTTCCGGTACGCTATTCAGCGTGGAATTGTTGA
ATACAACCCTACCCATGATCTAAGAGGAGCAATTGCCAGCCCCAAAATAAAGCATCGCCCTGCACTTCCGTTAGAACGAT
TACCAGAATTAATATCAAAAATTGATAGTTATACAGGGAGACCGTTAACTAAGTTGGCGGTATTATTTTCCCTTCATACT
TTTGTTCGCTCTAGTGAACTGAGACACGCAAGATGGGAGGAAATTAATTTTGAAACTGCAATGTGGACTATTCCTGCTCA
AAGAAAAAGAATTGAGGGGGTAAAATATTCAGAACGCGGGGCAAAAATGGGTAGTATTCATTATGTTCCATTATCTAATG
AAGCTATTGATGTTCTCGAAGCCATTAAAAAAATAAGTGGTGAGTATGAGCTTATTTTCCCCGGAGATAGTAACCCTTAC
AAACCGATGAGTGAGAACACAGTTAATAAGTCATTAAGGATTATGGGGTACGACACGCAGGCGGACATTTGCCTTCATGG
ATTTAGAGCAATGGCGTGCTCAGCCCTGACAGAATCAGGGTTATGGTCTAGGGATGCAGTGGAACGGCAAATGAGCCATC
AAGAACGAAATGAAGTGCGAGCGGCTTATGTTCACCTGGCACAACACATGCAAGAACGCCGGAGAATGATGCAATGGTGG
TCACATTATATAATCAGCAATTGTGAAAGTTATATTGCGCCCTATGAAATTAGTGAAAAACCATTGGCAATGCTTAAGGT
GGTAAAATAA

Protein sequence :
MALNELSPKKVENAKPKETDYKLTDGGSLYLLVKKNGTKAWRMNYRFNGKQATLALGVFPDVSLALARKRRDEARQLLAD
GVDPRVSKRAAPTEPSSATFQTIALEWHKGSIGHPSWKEITRIKILREMENHIFPFIGNKPIDSLKTSDLLPLLVRMSDQ
GIGATTGRVKTTLASVFRYAIQRGIVEYNPTHDLRGAIASPKIKHRPALPLERLPELISKIDSYTGRPLTKLAVLFSLHT
FVRSSELRHARWEEINFETAMWTIPAQRKRIEGVKYSERGAKMGSIHYVPLSNEAIDVLEAIKKISGEYELIFPGDSNPY
KPMSENTVNKSLRIMGYDTQADICLHGFRAMACSALTESGLWSRDAVERQMSHQERNEVRAAYVHLAQHMQERRRMMQWW
SHYIISNCESYIAPYEISEKPLAMLKVVK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
c3556 NP_755431.1 prophage P4 integrase Not tested PAI I CFT073 Protein 4e-106 54
int CAC81896.1 integrase Not tested LEE II Protein 2e-99 54
SESS1296_03598 AFO66301.1 bacteriophage integrase Not tested SESS LEE Protein 4e-101 53
SESS1635_03816 AFO66367.1 bacteriophage integrase Not tested SESS LEE Protein 4e-101 53
ECO111_3718 YP_003236059.1 putative integrase Not tested LEE Protein 4e-104 53
int AAK00456.1 Int Not tested SHI-1 Protein 2e-98 53
c5216 NP_757064.1 prophage P4 integrase Not tested PAI II CFT073 Protein 7e-105 53
ORF_1 AAZ04412.1 phage integrase Not tested PAI I APEC-O1 Protein 2e-104 53
ECUMN_3322 YP_002414004.1 integrase Not tested Not named Protein 8e-104 53
APECO1_3534 YP_854214.1 P4-like integrase Not tested PAI I APEC-O1 Protein 2e-104 53
int AAL51003.1 CP4-like integrase Not tested LEE Protein 3e-106 53
int AAT48697.1 CP4-like integrase Not tested PAI I 4787 Protein 3e-106 53
int-phe AAL57571.1 CP4-like integrase Not tested LEE Protein 5e-106 53
int AAL51028.1 CP4-like integrase Not tested LEE Protein 5e-106 53
Z4313 NP_289539.1 pathogenicity island integrase Not tested OI-122 Protein 3e-105 53
int-phe AAL60261.1 Int-phe Not tested LEE Protein 5e-106 53
ECO103_3550 YP_003223418.1 integrase Not tested LEE Protein 7e-106 53
int AAK16198.1 Int Not tested PAI-I AL862 Protein 4e-106 53
ECO26_5300 YP_003232178.1 integrase Not tested LEE Protein 7e-106 53
int ADD91747.1 P4 integrase Not tested PAI-I AL862 Protein 4e-106 53
APECO1_1051 YP_853069.1 phage integrase Not tested PAI IV APEC-O1 Protein 7e-75 52
intP4 CAE85151.1 CP4 integrase protein Not tested PAI V 536 Protein 4e-106 52
intB AAD37509.1 P4-like integrase Not tested PAI IV 536 Protein 1e-82 52
intB CAD42017.1 bacteriophage P4 integrase Not tested PAI II 536 Protein 1e-97 52
S4822 NP_838459.1 P4-type integrase Not tested SHI-1 Protein 7e-105 52
SF2964 NP_708738.1 P4-type integrase Not tested SHI-1 Protein 7e-105 52
int CAB59974.1 integrase Not tested HPI Protein 4e-102 51
int YP_002346908.1 integrase Not tested HPI Protein 4e-100 50
y2393 NP_669700.1 prophage integrase Not tested HPI Protein 4e-100 50
int2 NP_993013.1 integrase Not tested HPI Protein 4e-100 50
int CAA21384.1 - Not tested HPI Protein 4e-100 50
int CAA08754.1 integrase Not tested HPI Protein 9e-101 50
STY4821 NP_458899.1 integrase Not tested SPI-10 Protein 6e-96 50
int NP_807963.1 bacteriophage integrase Not tested SPI-7 Protein 5e-97 50
int NP_458759.1 bacteriophage integrase Not tested SPI-7 Protein 5e-97 50
unnamed ABR13507.1 phage integrase Not tested PAGI-6 Protein 6e-95 50
unnamed AAD17660.1 unknown Not tested HPI Protein 2e-97 49

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Entas_3110 YP_004829618.1 integrase family protein VFG1693 Protein 2e-106 54
Entas_3110 YP_004829618.1 integrase family protein VFG1536 Protein 5e-98 52
Entas_3110 YP_004829618.1 integrase family protein VFG0626 Protein 3e-105 52