Gene Information

Name : Entas_0301 (Entas_0301)
Accession : YP_004826841.1
Strain : Enterobacter asburiae LF7a
Genome accession: NC_015968
Putative virulence/resistance : Resistance
Product : AraC family transcriptional regulator
Function : -
COG functional category : K : Transcription
COG ID : COG2207
EC number : -
Position : 330029 - 330355 bp
Length : 327 bp
Strand : -
Note : KEGG: enc:ECL_00320 DNA-binding transcriptional regulator SoxS; PFAM: Helix-turn-helix, AraC type; SMART: Helix-turn-helix, AraC domain

DNA sequence : 
ATGTCGCATCAGCAAATTATTCAGACACTTATTGAATGGATTGATGAACATATCGACCAACCGTTGAACATTGATGTGGT
CGCTAAGAAGTCGGGCTATTCGAAATGGTATTTACAGAGAATGTTCCGCACAGTCATGCATCAAACGCTGGGCGATTACA
TTCGTCAGCGCAGACTACTGCTGGCAGCGCAGGCGTTACGCTCTACGCAACGGCCTATTTTTGATATCGCCATGGATCTG
GGTTATGTATCGCAACAGACCTTCTCCCGCGTGTTCCGTCGCGAGTTCGACCGCACGCCGAGCGATTATCGCCATCAGTT
GAATTAA

Protein sequence : 
MSHQQIIQTLIEWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVMHQTLGDYIRQRRLLLAAQALRSTQRPIFDIAMDL
GYVSQQTFSRVFRREFDRTPSDYRHQLN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
soxS YP_219131.1 DNA-binding transcriptional regulator SoxS Not tested SPI-4 Protein 5e-38 94
tetD AAL08447.1 putative transcriptional regulator TetD Not tested SRL Protein 1e-15 47
tetD AEA34665.1 tetracycline resistance protein D Not tested Not named Protein 1e-15 47

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Entas_0301 YP_004826841.1 AraC family transcriptional regulator CP001918.1.gene327.p Protein 4e-40 99
Entas_0301 YP_004826841.1 AraC family transcriptional regulator CP001138.1.gene4488. Protein 2e-38 94
Entas_0301 YP_004826841.1 AraC family transcriptional regulator CP000647.1.gene4499. Protein 4e-39 94
Entas_0301 YP_004826841.1 AraC family transcriptional regulator BAC0371 Protein 2e-37 91
Entas_0301 YP_004826841.1 AraC family transcriptional regulator NC_002695.1.914293.p Protein 2e-37 91
Entas_0301 YP_004826841.1 AraC family transcriptional regulator CP000034.1.gene4505. Protein 4e-37 90
Entas_0301 YP_004826841.1 AraC family transcriptional regulator CP001138.1.gene612.p Protein 1e-19 49
Entas_0301 YP_004826841.1 AraC family transcriptional regulator NC_010558.1.6276025. Protein 6e-16 47
Entas_0301 YP_004826841.1 AraC family transcriptional regulator CP000647.1.gene1624. Protein 6e-16 43
Entas_0301 YP_004826841.1 AraC family transcriptional regulator CP001918.1.gene2033. Protein 3e-16 43
Entas_0301 YP_004826841.1 AraC family transcriptional regulator NC_002695.1.917339.p Protein 2e-16 42
Entas_0301 YP_004826841.1 AraC family transcriptional regulator CP001138.1.gene1637. Protein 2e-16 42
Entas_0301 YP_004826841.1 AraC family transcriptional regulator BAC0560 Protein 2e-16 42
Entas_0301 YP_004826841.1 AraC family transcriptional regulator CP000034.1.gene1596. Protein 2e-16 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Entas_0301 YP_004826841.1 AraC family transcriptional regulator VFG0585 Protein 2e-38 94
Entas_0301 YP_004826841.1 AraC family transcriptional regulator VFG1038 Protein 6e-16 47