Gene Information

Name : Entas_1361 (Entas_1361)
Accession : YP_004827890.1
Strain : Enterobacter asburiae LF7a
Genome accession: NC_015968
Putative virulence/resistance : Virulence
Product : general secretory pathway protein E
Function : -
COG functional category : N : Cell motility
COG ID : COG2804
EC number : -
Position : 1479319 - 1480797 bp
Length : 1479 bp
Strand : +
Note : TIGRFAM: Type II secretion system gspE; PFAM: Type II secretion system protein E; KEGG: enc:ECL_02797 general secretion pathway protein E; SMART: ATPase, AAA+ type, core

DNA sequence :
GTGGATGAACTGACTAAAGTCATGTGCAGCAGCGGCTACGCGAAGGACAACGGCGTGTTGTTTTACAACAATGACGTGTT
TGTCCGGGAGGATGCGTCCGCGTTTGCCCTGCTGGAAATGCGCCGCAGGTTGGGCCGCTCTTTTACACCGGTCACACTGA
CGCCAGAAGCGTTTGACGAGATGCTGGCCAAAATCTGGCAGCAGAACAGCGGGGTTTCCCAACAGCTGGTGGATGACATG
GATGCAGATATTGATCTCATGGCACTCACCGAGGAGATCCCGGATAACGAAGATCTGCTCGATAACGACGAAAACTCGCC
GGTGATCCGCCTGATCAACGCCACTCTCGGCGAGGCGGTGAAAGACGGAGCATCGGATATTCATATCGAGACGTTCGAAC
GCACGCTGAGTATCCGTTTTCGTGTCGATGGCGTGCTGCGACCAGTGTTACAACCCGCCCGCAAACTCGCGCCGCTGCTG
GTTTCGCGTATCAAAGTGATGTCAAAACTCGATATCGCTGAAAAACGCCTTCCGCAGGATGGCCGTATCTCCCTGCGTAT
TGGCCGTAAGGCGATCGACGTGCGTGTTTCTACGATTCCGTCGCAGTATGGCGAGCGCGTGGTCATGCGTTTGCTCGATA
AAAGTAACCTCAAGCCGGATATCAACAAGCTCGGCCTGATTGATGAAGAGCTGGAAAAGCTAAAAGGGCTGATTGACCGC
CCGCACGGCATTATCCTGGTCACCGGGCCAACGGGCTCCGGTAAAAGTACCACGTTGTACGCCATTCTTTCGGCGCTCAA
CGGCCATGAACGTAACATTCTGACCGTAGAAGACCCGATTGAGTATGAGCTGGAAGGGGTGGGGCAGACGCAGGTTAACC
CGCGCGTGGACATGACCTTTGCCCGCGGGCTGCGCGCTATTCTGCGTCAGGACCCGGATGTGGTGATGATCGGGGAAATT
CGTGACGGTGAAACCGCGCAAATTGCGGTGCAGGCGTCGCTCACCGGTCACCTGGTCATGTCTACGCTGCACACCAACAG
CGCCGCAGGGGCGATTACGCGTCTGCGGGATATGGGGCTGGAGTCGTTTTTAATTGGTTCATCGTTGCTCGGTGTCATTG
CCCAGCGTCTGGTGCGTCGGCTGTGTAGCCACTGCCGCACCACCAGTCCGCTGGATGACAATGAAAAAGCGCTGTTCAGC
TTTATGGATACTCCGCCAAAAGCGATTTATCGCGCCGTGGGCTGTGAACATTGCCGCCAGAGTGGCTATCAGGGTCGCGC
CGGTATTCATGAGTTTCTGGTGGTGGATAGCACCATGCGCCGCGCCATTCATGAAGATAAAGACGAAATGTCCATCGAAA
CGCAGCTCTTTAAGCAGGCTTACAGCCTGCGCGAAAACGGGTTGCTGAAGGTCATCAGCGGTGTGACCTCTCTGGAAGAG
GTGATGCGCGTCACTGCTGAACGCGGAGGGGATGAGTAA

Protein sequence :
MDELTKVMCSSGYAKDNGVLFYNNDVFVREDASAFALLEMRRRLGRSFTPVTLTPEAFDEMLAKIWQQNSGVSQQLVDDM
DADIDLMALTEEIPDNEDLLDNDENSPVIRLINATLGEAVKDGASDIHIETFERTLSIRFRVDGVLRPVLQPARKLAPLL
VSRIKVMSKLDIAEKRLPQDGRISLRIGRKAIDVRVSTIPSQYGERVVMRLLDKSNLKPDINKLGLIDEELEKLKGLIDR
PHGIILVTGPTGSGKSTTLYAILSALNGHERNILTVEDPIEYELEGVGQTQVNPRVDMTFARGLRAILRQDPDVVMIGEI
RDGETAQIAVQASLTGHLVMSTLHTNSAAGAITRLRDMGLESFLIGSSLLGVIAQRLVRRLCSHCRTTSPLDDNEKALFS
FMDTPPKAIYRAVGCEHCRQSGYQGRAGIHEFLVVDSTMRRAIHEDKDEMSIETQLFKQAYSLRENGLLKVISGVTSLEE
VMRVTAERGGDE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
gspE YP_854406.1 type II secretion protein GspE Not tested PAI I APEC-O1 Protein 2e-126 61
gspE CAE85233.1 GspE, hypothetical type II secretion protein Not tested PAI V 536 Protein 2e-126 61

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Entas_1361 YP_004827890.1 general secretory pathway protein E VFG2048 Protein 2e-126 59
Entas_1361 YP_004827890.1 general secretory pathway protein E VFG0182 Protein 8e-120 56
Entas_1361 YP_004827890.1 general secretory pathway protein E VFG1876 Protein 2e-111 56
Entas_1361 YP_004827890.1 general secretory pathway protein E VFG0233 Protein 3e-83 49
Entas_1361 YP_004827890.1 general secretory pathway protein E VFG2426 Protein 4e-67 42