Gene Information

Name : Rhom172_0974 (Rhom172_0974)
Accession : YP_004824741.1
Strain : Rhodothermus marinus SG0.5JP17-172
Genome accession: NC_015966
Putative virulence/resistance : Unknown
Product : porphobilinogen deaminase
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0181
EC number : 2.5.1.61
Position : 1103665 - 1104603 bp
Length : 939 bp
Strand : +
Note : PFAM: Tetrapyrrole biosynthesis, hydroxymethylbilane synthase; TIGRFAM: Tetrapyrrole biosynthesis, hydroxymethylbilane synthase; HAMAP: Porphobilinogen deaminase; KEGG: rmr:Rmar_1891 porphobilinogen deaminase

DNA sequence : 
ATGCCTGAACCGACGCTGATCCTCGGAACGCGGGGAAGTGCGCTGGCGCTGCGGCAGGCCACGCTGATCCGATCCTTTCT
GGAAGCCCGTGGCGTATCGGTGCAGGTGGAAATCATTCGCACCACGGGCGACCATATTCAGGACGTGCCGCTGGCGAAGA
TCGGCGCCAAAGGGCTGTTCACGAAAGAGCTGGACCAGGCGCTGCTGGAAGGGCGCATCGATCTGGCCGTCCATTCTCTG
AAAGATCTGCCCACCGAAATGCCCGAAGGGCTGGTGGTGGCGGCCGTGCCGGAGCGGGCTCCGCCCTGGGATGTCTTCGT
GGCGCATCCGGACTTTGCAGGACGCCTCGAAGATCTGCCGACGGGGGCCGTGGTGGCTACTTCGTCGCTGCGGCGCCAGG
CGCAGCTGCGGGCCTGGCGTTCGGATCTGCAGGTGGTGCCGGTGCGCGGCAACGTCGATACGCGCCTGCGCAAGCTGGAA
GCCGAAGGGTGGCACGGGCTGATCCTGGCCGAGGCCGGACTGCAACGCCTGGGATTGCTGGAGCGCGTCCGTCAGCGCAT
CGCCCCGGAGATTTTGCTGCCGGCGGTGGGGCAGGGGGCGCTTGGAGTGGTCTGCGCCGAAGCCAACCGGCGCGTACGTG
CGTTGCTGCAGGCGTTGCATCACGCACCCACCGCCGCGGCCGTGCGGGCCGAGCGGGCGCTGCTGCATGCGCTCCAGGGC
GGCTGTCAGGTGCCTGTGGCCGCACTGGCCGCGGTGGAAGCCGATGGCACGCTGGTCCTGCGCGGGCGCGTGGTTTCGCT
CGACGGCCGCCAGGTGGTGGAGGGCGTCGAGCGTGGCCCGATGGCAGAACCCGAAGCGGTTGGTAAGGCGCTGGCCGAAA
AGCTCCTGAAACAGGGCGCCCGTGCGATTCTGGAAGAAATACGCGGGCAGCATCCCTGA

Protein sequence : 
MPEPTLILGTRGSALALRQATLIRSFLEARGVSVQVEIIRTTGDHIQDVPLAKIGAKGLFTKELDQALLEGRIDLAVHSL
KDLPTEMPEGLVVAAVPERAPPWDVFVAHPDFAGRLEDLPTGAVVATSSLRRQAQLRAWRSDLQVVPVRGNVDTRLRKLE
AEGWHGLILAEAGLQRLGLLERVRQRIAPEILLPAVGQGALGVVCAEANRRVRALLQALHHAPTAAAVRAERALLHALQG
GCQVPVAALAAVEADGTLVLRGRVVSLDGRQVVEGVERGPMAEPEAVGKALAEKLLKQGARAILEEIRGQHP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00327 YP_008207792.1 Porphobilinogen deaminase Not tested AbaR25 Protein 1e-51 49
BJAB0868_00331 YP_008211657.1 Porphobilinogen deaminase Not tested AbaR26 Protein 1e-51 49