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Name : Rhom172_0896 (Rhom172_0896) Accession : YP_004824665.1 Strain : Rhodothermus marinus SG0.5JP17-172 Genome accession: NC_015966 Putative virulence/resistance : Unknown Product : Seryl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0172 EC number : 6.1.1.11 Position : 1021334 - 1022614 bp Length : 1281 bp Strand : - Note : PFAM: Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved region; Seryl-tRNA synthetase, class IIa, N-terminal; TIGRFAM: Seryl-tRNA synthetase, class IIa; HAMAP: Seryl-tRNA synthetase; KEGG: rmr:Rmar_1968 seryl-tRNA synthetase DNA sequence : ATGCTGGATCTGCAACGCATTCGTCAGGAGCCCGATCGCGTCCGTGAAGCCATTCGCACGAAAGGCCTCGGCGATCCGGA ACTGGTCGATCGCGTGCTCGCACTCGACGCCGAGCATCGCCGCACCCTGACCGAACTGCAGGAGACACGCCACCGACAGA ACACGCTCGCCCGTCAGATCGGCCAGCTCATGCGCGAGGGGCGCCGCGACGAAGCGCAGGCCCTCATCGAGGAAAACACC CGGCTCAAAGAGCACGTCAAGACGCTGGAAGCCCGCGCCCGTGAGCTCGGCGAGGAACTCGAAGCGCTGTTGCTGGAGAT CCCCAACATTCCCCACCCGTCGGTGCCCGTCGGACGCGGCCCCGAGGACAACGTGGTGCTGCACGAGGAAGGGTGTCCGC CCACGTTCGACTTCGAGCCGCTGCCCCACTGGGAGCTGGCCGCGCGTCACGGACTGATCGACTTCGAGCGCGGCGCCAAG GTGACCGGAAGCGGCTTTCCGTTCTACGTGGGCAAAGGAGCCCGGCTGCAGCGCGCACTCATCCAGTTCTTTCTGGACCT GGCCGTGCAGCAGGGCGGCTACACCGAAATCCAGCCGCCGCTGTTCGTCAATGCCGACAGCGCCCGCGGCACCGGCCAGC TTCCGGACAAGGAAGACCTGATGTACGTGATCGAACGGGACGGCCTCTATCCGATCCCCACGGCCGAGGTGCCCGTCACG AACTACTTCCGCGACGAAATTCTGGAGGAAAGCCAGCTCCCGATCAAGTTCTGCGCTTACTCGCCCTGCTTCCGGCGCGA GGCCGGCTCCTACGGCCGGGACGTGCGCGGTCTGAACCGCCTGCATCAGTTCGACAAGGTGGAGCTGGTGCAGTTCGTCC ACCCCGACACCAGCTACGACGCGCTGGAGCAGCTCCGCGAAGACGCCGAGCGTCCGCTTCGACTACTGGGGCTGCCCTAC CGCCGCGTGCTGATGTGCACGGCCGAGACGGGCTTCACCCAGGCGAAAAAGTACGACCTGGAGGTCTGGAGCCCGGGCCA GCAGCGCTGGCTGGAAGTGTCGTCCATCTCCAACTTCGAGGACTTTCAGGCGCGGCGGGCGCGCGTCCGTTTCCGGCCGG CCGACGGCGGCAGGCCCCGCTTCGTGCATACGCTCAACGGTAGCGGCCTGGCGCTGCCCCGCGTGGTGGCCGCCCTGCTG GAGCACTACCAGCAGGCGGATGGCTCCATCGTGATCCCCGAAGTGCTCCGCCCCTATACCGGCTTCGATCGGATCGGCTG A Protein sequence : MLDLQRIRQEPDRVREAIRTKGLGDPELVDRVLALDAEHRRTLTELQETRHRQNTLARQIGQLMREGRRDEAQALIEENT RLKEHVKTLEARARELGEELEALLLEIPNIPHPSVPVGRGPEDNVVLHEEGCPPTFDFEPLPHWELAARHGLIDFERGAK VTGSGFPFYVGKGARLQRALIQFFLDLAVQQGGYTEIQPPLFVNADSARGTGQLPDKEDLMYVIERDGLYPIPTAEVPVT NYFRDEILEESQLPIKFCAYSPCFRREAGSYGRDVRGLNRLHQFDKVELVQFVHPDTSYDALEQLREDAERPLRLLGLPY RRVLMCTAETGFTQAKKYDLEVWSPGQQRWLEVSSISNFEDFQARRARVRFRPADGGRPRFVHTLNGSGLALPRVVAALL EHYQQADGSIVIPEVLRPYTGFDRIG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| serS | YP_003446791.1 | seryl-tRNA synthetase | Not tested | The aminoglycoside resistance gene cluster | Protein | 3e-80 | 49 |
