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Name : Rhom172_0075 (Rhom172_0075) Accession : YP_004823863.1 Strain : Rhodothermus marinus SG0.5JP17-172 Genome accession: NC_015966 Putative virulence/resistance : Unknown Product : phosphomethylpyrimidine synthase Function : - COG functional category : H : Coenzyme transport and metabolism COG ID : COG0422 EC number : - Position : 79550 - 81433 bp Length : 1884 bp Strand : - Note : TIGRFAM: Thiamine biosynthesis protein ThiC; HAMAP: Thiamine biosynthesis protein ThiC; KEGG: rmr:Rmar_0078 thiamine biosynthesis protein ThiC; PFAM: Thiamine biosynthesis protein ThiC DNA sequence : ATGATTCCCAAGCCACCTGCTGCGATTCGGCGCGTGTACGTGCAGGGCAACCGCTATCCGGAGCTGCGCGTCCCGTTCAA GGAGGTTCAGCTTTCGCCCACGCGCCTGCCGGACGGAAGCCTGGAGCCCAACGATCCGGTTCTGCTCTACGACACGCGCG GACCGTGGGGCGACCCCGACTTTCACGGCGACATTCGCCAGGGTCTGCCGCCGCTGCGGCGTCCCTGGATCGAGGCCCGC GGCGACGTGGAGGAATACGACGGACGGCCGGTGCAGCCCATCGACGACGGCTATCGGAACGAGGAAGAGCGTCGGCGGGC CGAGCAGCGCGGCAAGCTGCATCGCTGGCCCGGTCCGCGACGGCGTCCGCTGCGCGGCAAAAACGGCGCGGCCGTCACGC AGATGTACTATGCCCGCCAGGGCATCATCACGCCCGAGATGGAGTTCGTCGCCATCCGTGAAAACCAGCGGCGCGAGCGG CTCATCGAACTCCAGAAGGAGCCGGGCGACCGCTGGTCGCTTGCCTTCCAGCATCCGGGCCAACCCTGGGGCGCTCAGAT TCCGCCCGTCATCACGCCCGAATTCGTGCGCGACGAGGTGGCCCGCGGCCGCGCCATCATCCCGTGCAACGTCAACCATC CGGAGTGCGAGCCGATGATCATCGGCCGCAACTTCCTGGTCAAGATCAACGCGAACATCGGCACCTCGGCCGTCTCCAGC TCCATCGACGAAGAAGTCGAAAAGCTGCTGTGGGCCATCTACTGGGGCGCCGACACGGTGATGGACCTCTCGACGGGCAA AAACATCCACGAAACGCGCGAGTGGATCATCCGCAACAGTCCGGTGCCCATCGGGACGGTGCCCATCTACCAGGCGCTCG AAAAGGTGGGCGGCAAGCCCGAAGAGCTGACCTGGGAGATCTTCCGCGACACGCTCATCGAGCAGTGCGAGCAGGGCGTC GATTACATGACGATTCATGCGGGCGTCCGGCTCGCCTACATCCCGCTGACGGCCAACCGGCGCACGGGCATCGTCTCGCG CGGCGGCTCGATCATCGCCAAGTGGTGCCTGGCCCACCACAGGGAAAACTTCCTCTACACGCACTTTGAGGAAATCTGCG AGATTCTGCGCCAGTACGACGTGTCGATCAGTCTGGGCGACGGGCTGCGGCCCGGCTCCATTCAGGACGCCAACGACGAG GCGCAGTTTGCCGAGCTCAAGACGCTCGGCGAGCTGACCCGGATCGCCTGGAAATACGACGTCCAGGTGATGATCGAAGG CCCCGGCCACATTCCCATGCACCTGATCAAGGAGAACGTGGACCGGGAGCTGGAGGACTGCTACGAGGCGCCGTTCTACA CGCTCGGGCCGCTGGTGACCGACATCGCCCCGGCCTACGACCACATCACGTCGGCCATCGGCGCGGCGATGATCGGCTGG TACGGCGCGGCCATGCTCTGCTACGTCACGCCCAAGGAGCACCTGGGCCTGCCCAACAAGAACGACGTGCGCGAGGGCGT GATCGCCTACAAGATCGCCGCGCACGCGGCCGACCTGGCCAAGGGGCATCCCGGCGCCCAGTACTGGGACAACGCGCTCT CGAAGGCCCGCTTCGAATTCCGCTGGGAGGACCAGTTCAACCTGTCGCTCGATCCGGAGCGGGCCCGCGAGTACCACGAC GAGACGCTCCCGGCCGAAGGGGCCAAGCTGGCGCACTTCTGCTCGATGTGCGGGCCGAAGTTCTGCTCCATGAAAATCAC CGAGGAAATCCGGGCGATGGCCGCCGAGAAAGGCGTCGATGCCCGCCAGGTGATCGAAGAAGGGCTGGAGGAGAAGGCCC GCGAATTCCGCGAAAAAGGCGCCGAAATCTACACGGCTCCCTGA Protein sequence : MIPKPPAAIRRVYVQGNRYPELRVPFKEVQLSPTRLPDGSLEPNDPVLLYDTRGPWGDPDFHGDIRQGLPPLRRPWIEAR GDVEEYDGRPVQPIDDGYRNEEERRRAEQRGKLHRWPGPRRRPLRGKNGAAVTQMYYARQGIITPEMEFVAIRENQRRER LIELQKEPGDRWSLAFQHPGQPWGAQIPPVITPEFVRDEVARGRAIIPCNVNHPECEPMIIGRNFLVKINANIGTSAVSS SIDEEVEKLLWAIYWGADTVMDLSTGKNIHETREWIIRNSPVPIGTVPIYQALEKVGGKPEELTWEIFRDTLIEQCEQGV DYMTIHAGVRLAYIPLTANRRTGIVSRGGSIIAKWCLAHHRENFLYTHFEEICEILRQYDVSISLGDGLRPGSIQDANDE AQFAELKTLGELTRIAWKYDVQVMIEGPGHIPMHLIKENVDRELEDCYEAPFYTLGPLVTDIAPAYDHITSAIGAAMIGW YGAAMLCYVTPKEHLGLPNKNDVREGVIAYKIAAHAADLAKGHPGAQYWDNALSKARFEFRWEDQFNLSLDPERAREYHD ETLPAEGAKLAHFCSMCGPKFCSMKITEEIRAMAAEKGVDARQVIEEGLEEKAREFREKGAEIYTAP |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| BJAB0868_00321 | YP_008211647.1 | Thiamine biosynthesis protein ThiC | Not tested | AbaR26 | Protein | 0.0 | 67 |
| BJAB07104_00317 | YP_008207782.1 | Thiamine biosynthesis protein ThiC | Not tested | AbaR25 | Protein | 0.0 | 67 |
| thiC | YP_001598318.1 | thiamine biosynthesis protein ThiC | Not tested | MDA | Protein | 0.0 | 67 |
