|
Name : Rhom172_0732 (Rhom172_0732) Accession : YP_004824505.1 Strain : Rhodothermus marinus SG0.5JP17-172 Genome accession: NC_015966 Putative virulence/resistance : Resistance Product : ATP-dependent DNA helicase RecG Function : - COG functional category : L : Replication, recombination and repair COG ID : COG1200 EC number : - Position : 824606 - 826708 bp Length : 2103 bp Strand : + Note : TIGRFAM: DNA helicase, ATP-dependent, RecG; PFAM: DNA/RNA helicase, DEAD/DEAH box type, N-terminal; Nucleic acid binding, OB-fold, tRNA/helicase-type; DNA/RNA helicase, C-terminal; KEGG: rmr:Rmar_2142 ATP-dependent DNA helicase RecG; SMART: DEAD-like heli DNA sequence : GTGGCCGATCTGAACATCCTGTCCACCGAGGTGCGCTACCTGGCCGGAGTGGGACCGCGTCGGGCCGAGGTGCTGGCCCG CGTGGGTGTGCACACCGTCCGGGACCTGCTGCACTACTTTCCGCGGCGGTATCTGGACCGCTCGACGATCGTGCCGCTTC GGCGGCTGGACGAGCGCATGGGATCCGTGACGGTGGTCGGAACCGTGCGCGTGGCCGGGGTGGTGGAGGGCAAAGGCCGC AAGCGGTTCGAACTGATCCTGGAAGACGAGAGCGGTGGGCGTCTGAAGTGCGTCTGGTTCAACCGCCTGAACTGGGTGGC GAAGGCCTTCAAGCCGGGCGATCGGGTGGCCTTTCATGGTAAGGTGCAGCGCTTCGGCTACACGTTCTCGATGACGCATC CGGACTTCGATCGGCTCGACGGCGAGGGGGCCGCGCTGGCCACCGGCCGCATCATCGCCCTGTATCCGGGCGGCGCCGCC CTGGAAAAAGTCGGGCTCACCAGCCGCACGTTCCGGCGCATCCTGTACACGTTCTTCAAGCAGCACGGGCTGAAACTTCC GGAGATCCTTCCCGAATGGATCCGCACGCGCTACGGGCTGATGGACGGCCGCGTGGCGCTTCGGGCCGTGCATTTCCCAC GGAGTCAGGCGGAGCTGGCCCAGGCCCGCGAGCGGCTCAAGTTCGAGGAGTTGTTCTTCATCCAGCTCATGCTGGCCCGC ACGAAGCAGATCCGCCAGGCCGTGGCCGGACCCCGCTTCGGACCACCCGGCGAGCGCTTTCATCGCTTTCTGAATGAAAT CCTTCCCTTCGAGTTGACAGGTGCCCAGACGCGCGCTCTGGAGGACATCATCCGCGACACCACCTCGGGCCTGCAGATGA ACCGGCTCATCCAGGGCGACGTGGGGAGCGGCAAGACCGTGGTGGCCATGGCGGCCATCCTGCACGCGGTGGACAACGGA TACCAGAGCGCCTTCATGGTGCCCACCGAAATCCTGGCCGAGCAGCACTATGCGAACATGCGCCGTTACCTGGAGCCGCT GGGCGTCGAGGTGCGGCTGCTGCTGGGCGGGCAGCGCAAGTCGCTTCGCGAAGAAATCCTGGCCGATCTGGCCGAAGGAC GGGCGCACGTGGCCGTGGGCACGCACGCGGTGATTCAGGAGACCGTGCAGTTCCATCGGCTGGGACTGGCCATCGTGGAC GAGCAGCACCGCTTCGGCGTGGTGCAGCGGGCCGAGCTGTTCAACAAGGGCGAGAACCCGCACATGCTGCTCATGACGGC CACGCCGATCCCGCGTTCGCTGGCCATGACGCTCTACGGCGATCTGGACGTGTCGATCATCGACGAGCGGCCGGCCGGAC GCAAGCCCGTCATCACCTGGATCCGCTCCGAAAAACGTCGGGGTGAGGTGTACGCCTTTCTCCGTGAGCAACTCCGCCAG GGGCGCCAGGCCTATGTGGTCTATCCGCTCGTCGAGGAAAGCGAAAAAATGGACCTGCAGGACGCCGAGAACGGCTACCG ACGGCTCAAAGAGCTGTTTCGGCCCTACCGTGTGGACCTGATCCATGGCCGCATGCTGCCCTACGAGAAGGAGGAGGCCA TGGAGCGGTTCAAAAACGGCGAGACCGACATCCTGGTGGCCACGACGGTGATCGAGGTGGGCGTCGATGTGCCGAACGCG ACGGTGATGATCATCGAGCACGCCGAGCGGTTCGGACTGAGCCAGCTGCACCAGCTTCGGGGACGCGTCGGGCGCGGCGC CGAGCAGAGCTACTGCATCCTGATGGTGGACCACCGGCGCACGGCCGAAGCCGAGGAACGCCTGCGGGTGATGGCCGAGA CGGACGACGGCTTCAAGATCAGCGAGATGGACCTGAAGCTCCGCGGGGCGGGCGACTTTTTCGGCACGCGCCAGAGCGGA CTGCCCGATCTGAAGATTGCCGACATCACGCAGGACCAGCCGATTCTGATCAAAGCACGTGAGGCCGCCTTCGAGCTGAT CCGCCGCGACCCCAGCCTTGAGGCGCCCGAGCACGCCATGCTCCGCGCCTACTACGAGCGCTTCTACGCCACGCGCTCGC TGGGTTTTGCCCGGGTGGGATGA Protein sequence : MADLNILSTEVRYLAGVGPRRAEVLARVGVHTVRDLLHYFPRRYLDRSTIVPLRRLDERMGSVTVVGTVRVAGVVEGKGR KRFELILEDESGGRLKCVWFNRLNWVAKAFKPGDRVAFHGKVQRFGYTFSMTHPDFDRLDGEGAALATGRIIALYPGGAA LEKVGLTSRTFRRILYTFFKQHGLKLPEILPEWIRTRYGLMDGRVALRAVHFPRSQAELAQARERLKFEELFFIQLMLAR TKQIRQAVAGPRFGPPGERFHRFLNEILPFELTGAQTRALEDIIRDTTSGLQMNRLIQGDVGSGKTVVAMAAILHAVDNG YQSAFMVPTEILAEQHYANMRRYLEPLGVEVRLLLGGQRKSLREEILADLAEGRAHVAVGTHAVIQETVQFHRLGLAIVD EQHRFGVVQRAELFNKGENPHMLLMTATPIPRSLAMTLYGDLDVSIIDERPAGRKPVITWIRSEKRRGEVYAFLREQLRQ GRQAYVVYPLVEESEKMDLQDAENGYRRLKELFRPYRVDLIHGRMLPYEKEEAMERFKNGETDILVATTVIEVGVDVPNA TVMIIEHAERFGLSQLHQLRGRVGRGAEQSYCILMVDHRRTAEAEERLRVMAETDDGFKISEMDLKLRGAGDFFGTRQSG LPDLKIADITQDQPILIKAREAAFELIRRDPSLEAPEHAMLRAYYERFYATRSLGFARVG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| recG | CAJ77039.1 | ATP-dependent DNA helicase | Not tested | AbaR1 | Protein | 2e-97 | 44 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Rhom172_0732 | YP_004824505.1 | ATP-dependent DNA helicase RecG | BAC0356 | Protein | 1e-102 | 44 |
