Gene Information

Name : Rhom172_0706 (Rhom172_0706)
Accession : YP_004824479.1
Strain : Rhodothermus marinus SG0.5JP17-172
Genome accession: NC_015966
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : R : General function prediction only
COG ID : COG0325
EC number : -
Position : 801778 - 802512 bp
Length : 735 bp
Strand : +
Note : KEGG: rmr:Rmar_2168 alanine racemase domain protein; TIGRFAM: pyridoxal phosphate-dependent enzyme, YBL036C type; PFAM: Alanine racemase, N-terminal

DNA sequence :
ATGGCCGAGCAGCAGGTTCTGGACGTGCCTGCCATCCGGGAGCGGCTGGCCTGGATTCAGGAGCGGATCGAACGCGCCTG
TCGGCGGGCCGGACGCAGCCCCGACGAGGTGACGCTCATCGGCGTGACCAAGACGTTTCCGGTCGCGGTCGTGCAGGCGG
CCTACGAGGCCGGGCTGCGCCATTTCGGCGAAAACCGGGTGCAGGAGCTGGTGGCCAAGGCGGCCGTGCTGCCCGGACGC
ATCGAAGGCGGGGAGGTCACCTGGCACATGATCGGCCACCTGCAACGCAACAAGGCCAGAGACGTGGTGGCTCATGCTGA
CTGGCTGCACAGCCTGGACAACCTGCGGCTGGCCGAAACACTGGAACGCCGGGCGGCCATGGCCGATCGCGTGCTGCCGT
GCTTCGTGGAGGTGAACGTCTCGGGCGAACCGACCAAATTCGGACTCGAACCCGACGCCGTCCACGACTTTCTGGACGCG
CTGGCGCCTTTCGAGCACCTGGAGATCGTGGGACTCATGACGCTGGCGGCTCCTGCCGAAGATCCGGAAGCGGTGCGACC
CCAGTTCCGGCTGCTGCGCCGGCTGGCCGAGACCTATGACCGCCGCAACAATCCGCGCGTCCAGTTGCGCTACCTGTCGA
TGGGCATGAGCGGCGACTTCGAGGTGGCCATTGAAGAAGGAGCCACCCATGTGCGGATCGGAAGTGCGCTGTTCGGGCCA
CGCCTGGAGCCATGA

Protein sequence :
MAEQQVLDVPAIRERLAWIQERIERACRRAGRSPDEVTLIGVTKTFPVAVVQAAYEAGLRHFGENRVQELVAKAAVLPGR
IEGGEVTWHMIGHLQRNKARDVVAHADWLHSLDNLRLAETLERRAAMADRVLPCFVEVNVSGEPTKFGLEPDAVHDFLDA
LAPFEHLEIVGLMTLAAPAEDPEAVRPQFRLLRRLAETYDRRNNPRVQLRYLSMGMSGDFEVAIEEGATHVRIGSALFGP
RLEP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
CpI19_1562 YP_005686005.1 Pyridoxal phosphate enzyme, YggS family Not tested PiCp 6 Protein 9e-41 51
Cp1002_1555 YP_005681817.1 Pyridoxal phosphate enzyme, YggS family Not tested PiCp 6 Protein 9e-41 51
CpC231_1557 YP_005683917.1 Pyridoxal phosphate enzyme, YggS family Not tested PiCp 6 Protein 9e-41 51
cpfrc_01564 YP_003783964.1 hypothetical protein Not tested PiCp 6 Protein 9e-41 51