Gene Information

Name : Rhom172_0065 (Rhom172_0065)
Accession : YP_004823853.1
Strain : Rhodothermus marinus SG0.5JP17-172
Genome accession: NC_015966
Putative virulence/resistance : Resistance
Product : phosphonate-transporting ATPase
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : 3.6.3.28
Position : 66325 - 67071 bp
Length : 747 bp
Strand : +
Note : PFAM: ABC transporter-like; KEGG: rmr:Rmar_0068 ABC transporter related protein; SMART: ATPase, AAA+ type, core

DNA sequence : 
ATGACGGCAACGACCGACAACCGGCGCCCGCTCATCCAGCTCCGCGACGTGACCAAGATCTACAAGATGGGCACCCAGCA
GGTGCGGGCGCTCGATGGCGTTTCGCTGGACGTGTACCCGAACGAGTACGTGGCCATCATGGGCCCCTCGGGTTCGGGAA
AGTCCACGCTCATGAACATCCTCGGCTGTCTCGACACGCCCACCGGCGGCACCTACTACCTGAACGGCCGCGACGTGAGC
CGGCTTTCGGACGACGAGCTGGCCCGCATTCGCAACAAAGAAGTGGGGTTCGTCTTTCAAACGTTCAACCTGCTACCCCG
CGTGAACTGTCTGCAGAACGTCGAACTGCCCCTGATCTACGCGGGCGTGCGCAAGAGCCAGCGACGGGCGCTGGCCGAAG
CGGCGTTGCGCAGCGTGGGCCTGGGCGACCGGATGCACCACAAACCCAACGAGCTGTCCGGCGGGCAGCGCCAGCGCGTG
GCCATCGCCCGGGCGCTGGTCAACAATCCGTCGATCATCCTGGCCGACGAGCCCACCGGCAACCTGGACTCGAAGACCGG
CGAGGAAATCATGCGGCTGTTTGAGTTGTTGTACCGCCAGGGGCACACGCTGCTGGTGGTCACGCACGAGCACGACATCG
CCCAGCATGCCCGCCGGATCATTCATCTGCGGGACGGCCGGATCGAGCGTGACGAGCCGGTGGCGCAACCGCTGCTGGCG
GACCTGGACCTGAGTGCGGCGGTCTGA

Protein sequence : 
MTATTDNRRPLIQLRDVTKIYKMGTQQVRALDGVSLDVYPNEYVAIMGPSGSGKSTLMNILGCLDTPTGGTYYLNGRDVS
RLSDDELARIRNKEVGFVFQTFNLLPRVNCLQNVELPLIYAGVRKSQRRALAEAALRSVGLGDRMHHKPNELSGGQRQRV
AIARALVNNPSIILADEPTGNLDSKTGEEIMRLFELLYRQGHTLLVVTHEHDIAQHARRIIHLRDGRIERDEPVAQPLLA
DLDLSAAV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 6e-34 43
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 6e-34 43
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 6e-34 43
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-32 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Rhom172_0065 YP_004823853.1 phosphonate-transporting ATPase NC_012469.1.7686878. Protein 2e-64 59
Rhom172_0065 YP_004823853.1 phosphonate-transporting ATPase NC_008702.1.4606598. Protein 2e-49 52
Rhom172_0065 YP_004823853.1 phosphonate-transporting ATPase CP001581.1.gene798.p Protein 5e-40 44
Rhom172_0065 YP_004823853.1 phosphonate-transporting ATPase CP001581.1.gene598.p Protein 3e-43 42