Gene Information

Name : Rhom172_0467 (Rhom172_0467)
Accession : YP_004824248.1
Strain : Rhodothermus marinus SG0.5JP17-172
Genome accession: NC_015966
Putative virulence/resistance : Unknown
Product : L-ribulose-5-phosphate 4-epimerase
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG0235
EC number : 5.1.3.4
Position : 519272 - 519973 bp
Length : 702 bp
Strand : +
Note : KEGG: rmr:Rmar_0470 L-ribulose-5-phosphate 4-epimerase; PFAM: Class II aldolase/adducin, N-terminal

DNA sequence :
ATGGCGTTCGAAAAACTGAAGGCGGCGGTCTGGAAGGCGAACCGGGATATCGTGCGGAGCGGGCTGGTGCAGCTCACCTG
GGGCAATGCCAGCGGGGTGGATCGCCAGGCCGGCGTCATGGCCATCAAACCCAGCGGCGTGGACTACGACCGACTGCGGC
CGGACGACATGGTGATCGTCGAACTGGAAACCGGCCGCGTGGTGGAGGGCACGCTGAAGCCCTCGACCGACACGCCCACG
CACCGCTACCTGTACCTGGCGTTCGAAGAAATCGGCGGCATCGTGCACACGCACTCCCGACATGCGGTGGCCTGGGCCCA
GGCGCGCCGACCGATCCCGTGCCTGGGGACGACCCACGCCGACCATTTCTACGGCGAGATTCCGGTTACGCGCCCGTTGC
GGCCGGAAGAGGTCGCCGAAGCCTACGAGCACCAGACGGGCGTGGTGATCGCCGAGTGCTTCCGGGAGCGCGGGCTCGAT
CCGCTGGAGGTGCCCGGCGTGCTGGTGGCCGGGCATGGCCCTTTTGCCTGGGGCGAAACCCCGGAAAAAGCGGCCGAAAA
CGCGCTGGTGCTCGAGCTGGTGGCCGAAATGGCCCTCTACACCTGTCAGCTCAATCCCGAAGCGCCCGTGCTCGAATCGT
ACGTGCTGGACAAACATTTCCGGCGCAAACACGGAAGCCAGGCTTACTACGGACAGCGATAG

Protein sequence :
MAFEKLKAAVWKANRDIVRSGLVQLTWGNASGVDRQAGVMAIKPSGVDYDRLRPDDMVIVELETGRVVEGTLKPSTDTPT
HRYLYLAFEEIGGIVHTHSRHAVAWAQARRPIPCLGTTHADHFYGEIPVTRPLRPEEVAEAYEHQTGVVIAECFRERGLD
PLEVPGVLVAGHGPFAWGETPEKAAENALVLELVAEMALYTCQLNPEAPVLESYVLDKHFRRKHGSQAYYGQR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
araD YP_281517.1 L-ribulose-5-phosphate 4-epimerase Not tested Not named Protein 6e-49 55