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Name : Rhom172_0283 (Rhom172_0283) Accession : YP_004824068.1 Strain : Rhodothermus marinus SG0.5JP17-172 Genome accession: NC_015966 Putative virulence/resistance : Virulence Product : Lysyl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG1190 EC number : 6.1.1.6 Position : 306922 - 308493 bp Length : 1572 bp Strand : + Note : PFAM: Aminoacyl-tRNA synthetase, class II (D/K/N); Nucleic acid binding, OB-fold, tRNA/helicase-type; TIGRFAM: Lysyl-tRNA synthetase, class II; HAMAP: Lysyl-tRNA synthetase; KEGG: rmr:Rmar_0302 lysyl-tRNA synthetase DNA sequence : ATGAAGCGTGTACTGACCGAACAGGAACTGGAACGGCGCCGGGCGCGCCAGCAACTCGAAGCGATGGGGATCAATCCGTA CCCCTATCGCTGGGAGGTTACGGCCCATGCGGCCGAGATCCTGCAGAACTTTGACGATGAACGGCACCAGCCGCGGGAGG ACGGGCCGGCGCCCGAACCCTACGAGGTGTCGATTGCCGGCCGGATCATGACGCGGCGCATCATGGGCAAGGCCGCCTTC TTCGATCTGCAGGACGAAACCGGCCGCATTCAGGTGTACGTCCGGCGCCAGGACCTGCCCGAAGGCTTCTACGATCAGGT CTTCAAGAAACTGCTGGACATTGGCGACATCGTGGGCGTGGAGGGCTTCGTGTTCCGCACGCGCATGGGCGAAATCACCG TTCACGCCCGACGCCTCGAGTTGCTGGCCAAAGCGCTCCGTCCGTTGCCCGTCGTCAAAGAGCAGGACGGGAAGGTGTAC AACGAGGTGACGGACAAGGAATTTCGCTACCGGCAGCGGTACGCCGATCTGATCATCAACCCCGAAGTGCGGGAGGTTTT CCGCAAGCGGGCGCGCATGATTACGACGATCCGACGGTTCCTGGACGAACGGGGCTATCTGGAGGTCGAAACGCCCATTC TGCAGCCTATGTACGGGGGCGCTTCGGCCCGGCCCTTCATCACGTACCACAACGCGCTCGACATGCAGCTCTACCTGCGC ATTGCCGACGAGCTGTACCTGAAGCGGCTGATCGTGGGCGGCTACGAGGGCGTCTACGAGATCGGTAAAGACTTCCGGAA CGAAGGGCTCAGCCGCTTCCACAATCCGGAGTTCACGATGCTCGAGCTGTACGTGGCCTACAAGGACTACTACTGGATGA TGGACTTCGTGGAGGAGTTGCTCGAGCATGTGGCCACCGAAGTGACCGGCTCGCCGGAGGTGCAGTGGGGCGAGCACACG ATCTCGTTCCGCCGGCCCTGGCCGCGCATCCCGATGTTCGAGGCGATCAAGGAGCGGACAGGCTACGATCTCTACGGCAA GTCGCGCGACGAGCTGGCCGAGATCGCCCGCAAGCTGGGGCTGGAGATCGACGACACAATGGGCAGCGGCAAGATCATCG ACGAGATTTTCGGCGAATTCGTCGAGCCCCACCTGATCCAGCCCACCTTCATCATTGATTATCCGATCGAGCTGAGTCCG CTGGCGAAGCGCCACCGCGAAAAGCCCGGGCTGGTCGAGCGCTTCGAGGTGATCGTGGGCGGCAAGGAGCTGTGCAATGC CTTCAGTGAGCTGAACGATCCGGACGATCAGCGGGCACGCTTCGAGGAGCAGGCGCGGTTGCGGGCGGCCGGCGACGAGG AAGCCATGCAGATCGACGAAGACTTCCTGCGGGCACTGGAGTACGGCATGCCGCCGACGGCCGGGCTGGGCATCGGCATC GACCGGCTGGCCATGATTCTGACGAACCAGCCTTCGATTCGGGACGTGATTCTGTTTCCGCTGCTGCGGCCCGAGCAACC GGCCGTGCCGGCCGGATCCGACGGGGCCGAAAAGGAGACGTCCGAGGCCTGA Protein sequence : MKRVLTEQELERRRARQQLEAMGINPYPYRWEVTAHAAEILQNFDDERHQPREDGPAPEPYEVSIAGRIMTRRIMGKAAF FDLQDETGRIQVYVRRQDLPEGFYDQVFKKLLDIGDIVGVEGFVFRTRMGEITVHARRLELLAKALRPLPVVKEQDGKVY NEVTDKEFRYRQRYADLIINPEVREVFRKRARMITTIRRFLDERGYLEVETPILQPMYGGASARPFITYHNALDMQLYLR IADELYLKRLIVGGYEGVYEIGKDFRNEGLSRFHNPEFTMLELYVAYKDYYWMMDFVEELLEHVATEVTGSPEVQWGEHT ISFRRPWPRIPMFEAIKERTGYDLYGKSRDELAEIARKLGLEIDDTMGSGKIIDEIFGEFVEPHLIQPTFIIDYPIELSP LAKRHREKPGLVERFEVIVGGKELCNAFSELNDPDDQRARFEEQARLRAAGDEEAMQIDEDFLRALEYGMPPTAGLGIGI DRLAMILTNQPSIRDVILFPLLRPEQPAVPAGSDGAEKETSEA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | CAD66193.1 | putative lysil-tRNA synthetase LysU | Not tested | PAI III 536 | Protein | 1e-99 | 51 |
| lysS | YP_005163386.1 | lysyl-tRNA synthetase | Not tested | Not named | Protein | 1e-74 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Rhom172_0283 | YP_004824068.1 | Lysyl-tRNA synthetase | VFG1668 | Protein | 8e-100 | 51 |
