Gene Information

Name : Rhom172_2815 (Rhom172_2815)
Accession : YP_004826535.1
Strain : Rhodothermus marinus SG0.5JP17-172
Genome accession: NC_015966
Putative virulence/resistance : Unknown
Product : 3-oxoacyl-ACP reductase
Function : -
COG functional category : I : Lipid transport and metabolism
COG ID : COG1028
EC number : -
Position : 3220382 - 3221131 bp
Length : 750 bp
Strand : -
Note : KEGG: rmr:Rmar_2801 3-oxoacyl-(acyl-carrier-protein) reductase; TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) reductase; PFAM: Short-chain dehydrogenase/reductase SDR

DNA sequence : 
ATGACGTTCGATTTCTCCGGGCAGTCCGTACTGGTGACCGGCGGTACGCGCGGCATCGGCCGCGCCATCGTGGAGGCCTT
CGCAAAGGCCGGCGCCCGCGTCGCCTTCACCTATCGCAGCTCCGTGCAGGAGGCCGAGGCGCTCAAGGCGCAGCTCGAAG
CGCAGGGGACCGAGGTGCTGGCCTTTCAGGCCGATGCGGCCGACTTCGAGGCGGCCGGACGCGTCGTGGAGGCCGTGCTG
GAGGCCTGGGGGAAGATCGACGTGCTCGTGAACAATGCCGGGATCACGCGCGACAACCTGCTGCTCCGCATGAACGAGGC
GGACTGGGATGCCGTGCTGGCGGCCAATCTGAAAAGCGTGTTCAACTTCTGCAAGCACGTCTACCGGCCCATGATGCGCC
AGCGCAGCGGCCGCATCATCAACATCTCGTCGGTGGTGGGCGTGGTGGGCAATGCCGGGCAGACGAACTATGCGGCCTCG
AAGGCCGGCATCATCGGCTTCTCGAAGAGCCTGGCGCGGGAGCTGGGCAGCCGGGGCATTACGGTGAACGTGGTGGCGCC
CGGCTACATCGAAACCGACATGACGGCCGCGCTGCCCGAACAGGCCCGTCAGGCCATGCTGAGCGGCATTCCGCTGGGCC
GGCCGGGCACGCCCGAAGACGTGGCGCAGGCCGTGCTGTTTCTCGCCTCGCCTGCCGCCGGCTACATTACCGGACACGTG
CTGCACGTCGACGGCGGCATGGCCATGTAG

Protein sequence : 
MTFDFSGQSVLVTGGTRGIGRAIVEAFAKAGARVAFTYRSSVQEAEALKAQLEAQGTEVLAFQADAADFEAAGRVVEAVL
EAWGKIDVLVNNAGITRDNLLLRMNEADWDAVLAANLKSVFNFCKHVYRPMMRQRSGRIINISSVVGVVGNAGQTNYAAS
KAGIIGFSKSLARELGSRGITVNVVAPGYIETDMTAALPEQARQAMLSGIPLGRPGTPEDVAQAVLFLASPAAGYITGHV
LHVDGGMAM

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAT96098.1 putative short-chain type regulator dehydrogenase Not tested T-PAI Protein 2e-26 41
unnamed AAT96175.1 putative short-chain type regulator Not tested T-PAI Protein 2e-26 41
unnamed AAT96227.1 putative short-chain type regulator Not tested T-PAI Protein 1e-26 41
unnamed AAT96054.1 putative short-chain type regulator Not tested T-PAI Protein 8e-27 41