Gene Information

Name : Rhom172_2793 (Rhom172_2793)
Accession : YP_004826513.1
Strain : Rhodothermus marinus SG0.5JP17-172
Genome accession: NC_015966
Putative virulence/resistance : Unknown
Product : catalase
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG0753
EC number : 1.11.1.6
Position : 3188518 - 3190014 bp
Length : 1497 bp
Strand : -
Note : KEGG: rmr:Rmar_2779 catalase; PFAM: Catalase related subgroup; Catalase-related immune responsive

DNA sequence :
ATGGAAGCTCGGAAAGCACCGCGTCTGACCACGGCCGACGGCCGGCCGATCGGCGACAACCAGAACGCGTTGACGGCGGG
ACCGCGGGGCCCGCTGCTCATCCAGGATGTGCAGCTGCTGGAGCAGATCCAGCACTTCAACCGGGAGCGCATCCCGGAGC
GCGTCGTGCACGCCAAGGGAAGCGGCGCCTACGGCACCTTCACCGTCACGAACGACGTGACCCGCTACACGAAGGCCGCT
TTCCTGTCGGAGGTGGGCAAGCAGACCGAGGTGTTCGTGCGCTTTTCGACGGTGGCGGGCGAGCGGGGTGCAGCCGATGC
CGAACGGGACGTGCGGGGCTTCGCCGTGAAGTTCTACACCGAAGAAGGCAACTTCGACCTGGTCGGCAACAACACGCCGG
TCTTCTTCGTGCGCGATCCCTACAAATTCCAGATGTTCATCCACTCGCAGAAGCGGCACCCGAAGACGAACCTTCGGGAT
CCCGACATGCAGTGGGACTTCTGGTCGCTCTGCCCCGAGTCGCTGCACCAGGTGACGATTCTTTTTTCCGATCGCGGGAT
TCCGGCCTCGTACCGCCACATGAACGGCTACGGCAGCCACACCTATTTGATGTACAACGACCGGGGCGAGCTTTTCTGGG
TCAAATTCCATTTCAAGACGCAGCAGGGCATCAAGTGCCTGACCGACGAAGAGGCCGCGCGCCTGATCGGTGAGGATCGG
GAGACGCACCAGCGGGACCTCTACGAGGCGATCGAGCGTGGCGACTATCCGCGCTGGACGCTTTACATCCAGGTGATGAC
GCCGGAGCAGGCCGAGAACTTCCGCTGGAATCCGTTCGATCTGACGAAGGTCTGGCCGCACGCCGAGTTTCCGCTGATCG
AGGTCGGCGTGCTGGAGCTGAATCGCAACCCGGAGAACTATTTCGCCGAGGTCGAGCAGGCGGCCTTCAAGCCCAGCGCG
TTCGTGCCGGGCATCGGGCCCAGCCCCGACAAAATGCTCCAGGCCCGGCTGATGAGCTATGCCGATGCGCACCGTTACCG
GCTGGGCGTCAACTATCAGCAGCTGAAGGTCAACCGGCCGCGCTGCCCGGTGCACCACTATCAGCGGGACGGTTTCATGG
CGCAGATCGAGGGCTCGGGGCACCCGAACTACTTCCCGAACTCGATTCCCGGTGCGCCGCAGGACGATCCGATCTACAAG
GAGCCGGCCTGGCACCTGGGCGAGGTGATCGTCGATCGGTACGACAGCCGGAAGGATCACGACGACTACACGCAGGCGGG
CAATCTCTACCGCCTGTTCGACGAAGGCCAGAAGGATCGCCTGGCGCGGGCCATTGCCGCGAGCCTGGGCCAGGCGCGCC
TGGAGGTGCAGAAACGCCAGCTCGGGCACTTCTACCGGGCCGACGTGGACTATGGCCGGCGGGTTGCCCGGGCGCTGGGC
TTCGATCCGGCCACCATCGAAGCGGAACTGGGCATCGACGCTTCGGTCGCCGGCTGA

Protein sequence :
MEARKAPRLTTADGRPIGDNQNALTAGPRGPLLIQDVQLLEQIQHFNRERIPERVVHAKGSGAYGTFTVTNDVTRYTKAA
FLSEVGKQTEVFVRFSTVAGERGAADAERDVRGFAVKFYTEEGNFDLVGNNTPVFFVRDPYKFQMFIHSQKRHPKTNLRD
PDMQWDFWSLCPESLHQVTILFSDRGIPASYRHMNGYGSHTYLMYNDRGELFWVKFHFKTQQGIKCLTDEEAARLIGEDR
ETHQRDLYEAIERGDYPRWTLYIQVMTPEQAENFRWNPFDLTKVWPHAEFPLIEVGVLELNRNPENYFAEVEQAAFKPSA
FVPGIGPSPDKMLQARLMSYADAHRYRLGVNYQQLKVNRPRCPVHHYQRDGFMAQIEGSGHPNYFPNSIPGAPQDDPIYK
EPAWHLGEVIVDRYDSRKDHDDYTQAGNLYRLFDEGQKDRLARAIAASLGQARLEVQKRQLGHFYRADVDYGRRVARALG
FDPATIEAELGIDASVAG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
katA ABD94664.1 catalase isozyme A Not tested ExoU island A Protein 2e-132 60
katA YP_005126717.1 catalase Not tested Not named Protein 1e-107 48
katA YP_005680448.1 catalase Not tested PiCp 3 Protein 2e-103 46
katA YP_005682539.1 catalase Not tested PiCp 3 Protein 2e-103 46
katA YP_003782575.1 catalase Not tested PiCp 3 Protein 2e-103 46
katA YP_005684630.1 catalase Not tested PiCp 3 Protein 2e-103 46