Gene Information

Name : Rhom172_2135 (Rhom172_2135)
Accession : YP_004825874.1
Strain : Rhodothermus marinus SG0.5JP17-172
Genome accession: NC_015966
Putative virulence/resistance : Unknown
Product : single-strand binding protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG0629
EC number : -
Position : 2420718 - 2421203 bp
Length : 486 bp
Strand : -
Note : KEGG: rmr:Rmar_0746 single-strand binding protein; TIGRFAM: Single-strand DNA-binding; PFAM: Primosome PriB/single-strand DNA-binding

DNA sequence :
ATGGCACGCAGCATCAACAAAGTCATTCTCGTCGGCAACCTGGGGCAGGATCCCGAACTCCGCTACACGCCCGGCGGCAC
GGCCGTCTGCAACATGCGTCTGGCCACCAACGAAGTCTATCGGGATGCCGATGGTAACATGGTGGAGCGCACGGAGTGGC
ACAATCTGGTGGCCTGGGGACGGCTGGCCGAGATCTGCAACCAGTACCTCCGGAAAGGCTCCAAGGTGTACGTCGAAGGC
TCGCTCCAGACGCGCTCGTGGGAGGACCGGGATGGCAATACCCGGTACACGACGGAGATCAAGATCCGGGAGATGGTGAT
GCTGGATCCGCGGAGCGATGCTGCGCCCGAGCCGGAAGCGACCGTTACGGCTCGGGCGCAGCGCCAGGCAGCCGCGCCGC
GTCAGACGTTCGCGCCGGAGCCCGAGCCGGAGGCCTTCGATGAAGACGCCTACACGCTGTCGCCGGACGACGACCTGCCG
TTCTGA

Protein sequence :
MARSINKVILVGNLGQDPELRYTPGGTAVCNMRLATNEVYRDADGNMVERTEWHNLVAWGRLAEICNQYLRKGSKVYVEG
SLQTRSWEDRDGNTRYTTEIKIREMVMLDPRSDAAPEPEATVTARAQRQAAAPRQTFAPEPEPEAFDEDAYTLSPDDDLP
F

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ssb1 YP_005176252.1 single-stranded DNA-binding protein Not tested ICEPmu1 Protein 2e-23 55