Gene Information

Name : Rhom172_0163 (Rhom172_0163)
Accession : YP_004823948.1
Strain : Rhodothermus marinus SG0.5JP17-172
Genome accession: NC_015966
Putative virulence/resistance : Unknown
Product : thioredoxin reductase
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG0492
EC number : 1.8.1.9
Position : 175510 - 176514 bp
Length : 1005 bp
Strand : +
Note : TIGRFAM: Thioredoxin reductase; KEGG: rmr:Rmar_0181 thioredoxin reductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase

DNA sequence :
ATGACGCAACCCGATTTGTCGGCCTTCGAGGGGATCGACTTCGAAGGCGCCGAACACCACACGCTGGTGATCATCGGGAC
CGGACCGGCCGGACTGACGGCCGCGCTCTATGCCGCACGAGCCAACCTGGCCCCGGTGGTGTTTCGCGGGCCGGAGCCGG
GCGGCCAGCTCATCACCACGACCGAAGTCGAAAACTATCCGGGCTTTCCAGAAGGCATTCTGGGGCCCGAACTCATGCAA
CGCTTCGAGCAGCAGGCCGCCCGCTTCGGAGCCGATCTGCGCTACGGCACGGTGACGGCCGTGGACTTCTCGCGTCGGCC
GTTCCGCCTGCTCGTTGACGATCAGACGCCGGTGCTGGCCGATGCCGTGATCATCGCCACCGGCGCCTCGGCCAAATACC
TGGGGCTGGAGAACGAGCGGCGGCTGATCGGCCGTGGCGTTTCGGCCTGCGCCACGTGCGACGGTGCCTTCTTCCGGGGC
ATGGAGGTAGCTGTCGTGGGCGGCGGCGACACGGCCATGGAAGAAGCGCTCTTCCTGACGCGCTTTGCCACGCGCGTGTA
CGTCATCCACCGGCGTGATCAGCTCCGGGCCTCGAAGATCATGCAGGAGCGCGCCTTTAAAAACGAAAAGATCACCTTCA
TCTGGAATACGGTGGTCGAGGATGTGCTGGGCGAAAACGAAGTGGAAGGCGTGCGTCTGCGCAATGTGAAAACCGGCGAG
GTCTCGGTGCTGCCCGTAAAAGGGCTCTTCATTGCGATCGGCCACAAGCCCAACACGGAGGTCTTCCGGGGCTGGCTGGA
AATGGACGAGCAGGGCTACATCAAGACGAAGAACTGCTCGACGCATACCAGCATCCCCGGGGTCTTCGCCTGCGGGGACG
TGCAGGACCGCGTCTACCGTCAGGCCGTGACGGCGGCCGGTTCGGGCTGCATGGCGGCCATCGACGCCGAGCGCTGGCTG
GCCGAGCAGGAGCACGCGGCGGCATCGACGACCGTGGCCGGATGA

Protein sequence :
MTQPDLSAFEGIDFEGAEHHTLVIIGTGPAGLTAALYAARANLAPVVFRGPEPGGQLITTTEVENYPGFPEGILGPELMQ
RFEQQAARFGADLRYGTVTAVDFSRRPFRLLVDDQTPVLADAVIIATGASAKYLGLENERRLIGRGVSACATCDGAFFRG
MEVAVVGGGDTAMEEALFLTRFATRVYVIHRRDQLRASKIMQERAFKNEKITFIWNTVVEDVLGENEVEGVRLRNVKTGE
VSVLPVKGLFIAIGHKPNTEVFRGWLEMDEQGYIKTKNCSTHTSIPGVFACGDVQDRVYRQAVTAAGSGCMAAIDAERWL
AEQEHAAASTTVAG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
trxB AFC76431.1 TrxB Not tested AbaR5 Protein 7e-69 54
trxB CAJ77014.1 thioredoxin reductase Not tested AbaR1 Protein 6e-69 54