Gene Information

Name : Rhom172_1501 (Rhom172_1501)
Accession : YP_004825259.1
Strain : Rhodothermus marinus SG0.5JP17-172
Genome accession: NC_015966
Putative virulence/resistance : Virulence
Product : glutamine synthetase, type I
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG0174
EC number : -
Position : 1712115 - 1713566 bp
Length : 1452 bp
Strand : +
Note : KEGG: rmr:Rmar_1443 glutamine synthetase, type I; TIGRFAM: Glutamine synthetase type I; PFAM: Glutamine synthetase, catalytic region; Glutamine synthetase, beta-Grasp

DNA sequence : 
ATGGCGCCGCCACTGATCACGGAGATGCCGGTGGAGACCCGGCAGGAAGCCATCCGGAAGGTGTTCGAGCTGATCGAAAA
GGAAGGGGCGCAGATGGTCGACATTCGCTTCGTCGACTTTCTGGGCCAGCAGCAGCACTTTTCGATCCCGGCCGATCAGT
TCGAGCCCGATCACTTCGATGAGGGTGTGGGCTTCGACGGCTCGTCGATCCGGGGCTGGAAGAGCATTCACGAGTCGGAC
ATGCTGGTGATCCCGGATCCGACGACGGCCTTCATCGATCCGTTCTTCCAGCACAAGACGGTCGTACTCATCGGCGAAAT
CCACGAGCCCGGTACGCTGGAGCCCTTTCAGCGCTGTCCGCGGGGCATTGCCCGTCGCGCCGAGCAGTTCCTGAAGCAGT
CAGCCATTGCCGACGTGGCCTACTTCGGGCCGGAGGCCGAGTTCTTCGTCTTCGATCACGCCTCGTTCGACGAAGGGCCC
AACCACGCCTTCTACAAGATCGATTCGGACGAAGGCGCCTGGAACCGGGGCCGGCACGACAGCCTGGGCTACAAGCCCAC
CACGAAGGGTGGCTACTTCCCGGTGCCGCCGACCGACTCGCTGCAGAACCTGCGCGCCGAGATGGTGCTCCACATGGAGG
CCATCGGCATTCCGGTCGAGTGCCAGCACCACGAGGTGGCCTCCGGCGGCCAGTGCGAGATCGACTTCCGCTTCCAGCCG
CTGCTGAAGTGCGCCGATTTCCTGATGAATTACAAGTACATCGTCAAAAACACGGCCTGGAAGTACGGCAAGACGGTCAC
CTTCATGCCCAAGCCGATCTTCGGCGACAACGGTTCGGGCATGCACACGCACATCTCGCTCTGGAAGGATGAGCAGCCGC
TGTTCTTCGGCGACAGATACGCCGGGCTGAGCCAGGAGGCGCTCTGGTTCATCGGCGGTATCCTGCACCACGCACCGGCT
GTCATCGCCTTCACGAACCCGACGACGAACTCCTTCCGGCGGCTGGTGCCGGGCTTCGAGGCGCCGGTGAACCTGGTCTA
CTCGGCCCGGAACCGCAGCGCCGCCATTCGCATCCCGGTTTACTCGGATAGCCCCAAGGCCAAGCGGATCGAGGCCCGCT
TCCCGGACCCGTCCTGCAATCCGTACCTGGCCTTCTCGGCGCTGCTGCTGGCCGGGCTGGACGGCATCCGCAATCAGATC
GATCCGGGCCAGCCGGTCGACCGGGACATCTACCACCTGTCGCCCGAAGAGCAGGCCGCGCTGCCCCAGGCGCCCAAGTC
GCTCGAAGAGGCGCTCGAGGCGCTCGAAAAGGACCACGAATTCCTGCTGCAGGGCGGCGTCTTCACCGAGGACGTGATCG
AGGCCTGGATCCAGTACAAGTACGACAACGAGGTGCAGCAGCTCCGGATGCGCCCGCATCCATACGAGTTCTCGCTGTAC
TTCGACGTGTAA

Protein sequence : 
MAPPLITEMPVETRQEAIRKVFELIEKEGAQMVDIRFVDFLGQQQHFSIPADQFEPDHFDEGVGFDGSSIRGWKSIHESD
MLVIPDPTTAFIDPFFQHKTVVLIGEIHEPGTLEPFQRCPRGIARRAEQFLKQSAIADVAYFGPEAEFFVFDHASFDEGP
NHAFYKIDSDEGAWNRGRHDSLGYKPTTKGGYFPVPPTDSLQNLRAEMVLHMEAIGIPVECQHHEVASGGQCEIDFRFQP
LLKCADFLMNYKYIVKNTAWKYGKTVTFMPKPIFGDNGSGMHTHISLWKDEQPLFFGDRYAGLSQEALWFIGGILHHAPA
VIAFTNPTTNSFRRLVPGFEAPVNLVYSARNRSAAIRIPVYSDSPKAKRIEARFPDPSCNPYLAFSALLLAGLDGIRNQI
DPGQPVDRDIYHLSPEEQAALPQAPKSLEEALEALEKDHEFLLQGGVFTEDVIEAWIQYKYDNEVQQLRMRPHPYEFSLY
FDV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
glnA YP_003728749.1 glutamine synthetase Not tested cag PAI Protein 4e-96 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Rhom172_1501 YP_004825259.1 glutamine synthetase, type I VFG1399 Protein 1e-126 58