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Name : Rhom172_1398 (Rhom172_1398) Accession : YP_004825161.1 Strain : Rhodothermus marinus SG0.5JP17-172 Genome accession: NC_015966 Putative virulence/resistance : Virulence Product : ATPase AAA-2 domain-containing protein Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : - Position : 1599857 - 1602409 bp Length : 2553 bp Strand : + Note : KEGG: rmr:Rmar_1343 ATPase AAA-2 domain protein; PFAM: ATPase associated with various cellular activities, AAA-2; Clp, N-terminal; ATPase, AAA-type, core; UvrB/UvrC protein; Clp ATPase, C-terminal; SMART: ATPase, AAA+ type, core DNA sequence : ATGGAAGGAAACTTCTCCAACAGAGTTCGGGACGTTATTGCCTACAGCCGGGAAGAAGCGATCCGGCTGGGACACGACTA CATCGGAACGGAACACCTGTTGCTTGGCATCATCCGGGAGGGCGAAGGCATTGCCGTACAGATCCTTCGCAACCTCGGAT GCGACCTGCTGAAACTGAAAAAGGCGATCGAAGACGCCGTCCGTAGCACCAGCGGCCCGACGACCGTCGTGGGGAACCTC CCCCTGACGAAGCAGGCCGAAAAGGTGCTGAAAATAACCTACCTGGAAGCCAAACTGTACAAAAGCGATGTCATCGGCAC CGAACACCTGCTGCTGAGTCTGCTCCGCGACGAGGAAAACATTGCCGCCCAGATTCTGCAGCAGGGTTTCTCGATCACGT ACGACGCCGTCCGGGCCGAGCTCGACGCCATCCTGAGCGGCAAGGCTTCGGCCCGCGGCAGTAGCAGCAGCGGAAGCGGC AGTCGATTTTCATCCAGATACGGCAGAGAGTACACGAAAATGGAAAAGAGCAAAACACCCGTGTTGGACAACTTCGGCCG CGACCTGACCAAGCTGGCCGAAGAGGGGAAGCTGGATCCCGTCATCGGACGGGAGCGGGAGATCGAGCGGGTTGCCCAGG TGCTCAGCCGCCGCAAGAAAAACAACCCGGTGCTCATCGGAGACCCGGGTGTCGGGAAGACCGCCATCGTCGAGGGCCTG GCCATGCGCATCGTGCAGCGCAAGGTCAGCCGCGTCCTCTACGACAAGCGGATCGTCTCGCTCGACCTGGCCGCGCTGGT GGCCGGCACGAAGTACCGCGGCCAGTTCGAGGAGCGCATGAAGGCGGTCATGAACGAGCTCGAGAAGAACCCGGACGTCA TCCTCTTCATCGACGAGCTGCATACGATCGTCGGGGCGGGGGGCGCCTCGGGCTCGCTCGACGCCTCCAACATGTTCAAG CCGGCGCTGGCGCGTGGTGAAATCCAGTGCATCGGCGCCACGACGCTGGACGAATACCGCCAGTACATCGAAAAAGACGG CGCGCTCGATCGCCGCTTCCAGAAAATCATCGTGGATCCCTCCACGCCGGAGGAGACCATCGAGATTCTGAAGAAGATCA AGGATCGTTACGAAGAGCACCACAACGTCCGCTACACGGACGAGGCGATCGAGCTGTGCGTCAAGCTCTCGGAGCGCTAC ATCACCGATCGCTTCCTCCCCGACAAGGCCATCGACGTCATGGACGAGGCCGGGGCCCGGGTGCACCTGAAGAACATCCG GGTTCCGAAGGAGATCGTCGAGCTGGAGGAAGAGATCGAACGCGTCCGGGAGGAAAAGAACCGGGTGGTCAAGAGCCAGC GCTTCGAGGAGGCGGCCCGGCTCCGCGACCGGGAGAAGAAGCTGCTCGAAGAGCTGGAAGAGGCCAAGCGTGCCTGGGAA GAGCGCGTGCAGCATGAGGTGCACGAAGTCACCGCTCAGGACATCGCCGAAGTCGTAGCCATGATGACCGGCATCCCGGT CGACAAGATCACCGAGCCCGAGCAGAAGAAGCTCCTCCGCATGGAGGAGGCGCTCAAGAGCCGGGTGATCGGTCAGGACG AGGCGATCTCCAAGCTGGCCCGAGCCATCCGGCGCACACGGGCCGGCCTCAAAGACCCGAAGCGGCCGATCGGCTCCTTC ATCTTCCTCGGACCGACCGGCGTCGGAAAGACCGAGCTGGCCAAGGCGCTGACGGAGTACCTGTTCGACTCCGAGGATGC GCTCATTCGCATCGACATGAGCGAGTACATGGAGAAATTCTCCGTCAGCCGCCTGATCGGTGCCCCGCCGGGCTACGTGG GCTACGAGGAGGGTGGCCAGCTCACCGAAAAGGTGCGGCGTAAGCCCTACTCCGTCGTGCTGCTCGACGAGATCGAAAAG GCGCACCCGGATGTGTTCAACATCCTGTTGCAGGTGCTCGACGACGGCATACTGACCGACGGACTGGGCCGCCGCGTCGA CTTCCGCAACACGATCATCATCATGACCTCGAACATCGGGGCTCGGGAGATCAAGAACCTGGGCAAGGGCATCGGCTTTG CACAGACCGAGCAGCCCTTCAACTACCAGGCGATGAAATCCACCGTTGAAGATGCGCTCAAGCGCGTCTTCAACCCCGAG TTCCTGAACCGAATCGACGACGTGATCGTCTTCCAGCCGCTGGAGAAGCAGCATATTTACCAGATCATCGACCTGATGAT CTCCGACCTGCTCAAGCGGGCGGGCGACCTGGGCATTCAGGTCGAGTTCACGCAGGCGGCGAAAGACTTCCTCGTCGAAA AGGGCTACGACCCGCAGTACGGCGCCCGGCCACTCCGGCGGGCCATCCAGAAGTACGTGGAGGACCCGCTGGCCGAGGCG ATTCTGAGTAACGAGGTCAAGGAAGGCGATCTCGTCGTGATCAACTACGACGAATCGGTCAAACCGGGCGAGCTGATCTT CGAGGCGCGCCCGGCCGCCGAGGCTGCTTCGTCCGAGAAGCCCGAAACGGCCGAGGAAGGCACCTCGGAATGA Protein sequence : MEGNFSNRVRDVIAYSREEAIRLGHDYIGTEHLLLGIIREGEGIAVQILRNLGCDLLKLKKAIEDAVRSTSGPTTVVGNL PLTKQAEKVLKITYLEAKLYKSDVIGTEHLLLSLLRDEENIAAQILQQGFSITYDAVRAELDAILSGKASARGSSSSGSG SRFSSRYGREYTKMEKSKTPVLDNFGRDLTKLAEEGKLDPVIGREREIERVAQVLSRRKKNNPVLIGDPGVGKTAIVEGL AMRIVQRKVSRVLYDKRIVSLDLAALVAGTKYRGQFEERMKAVMNELEKNPDVILFIDELHTIVGAGGASGSLDASNMFK PALARGEIQCIGATTLDEYRQYIEKDGALDRRFQKIIVDPSTPEETIEILKKIKDRYEEHHNVRYTDEAIELCVKLSERY ITDRFLPDKAIDVMDEAGARVHLKNIRVPKEIVELEEEIERVREEKNRVVKSQRFEEAARLRDREKKLLEELEEAKRAWE ERVQHEVHEVTAQDIAEVVAMMTGIPVDKITEPEQKKLLRMEEALKSRVIGQDEAISKLARAIRRTRAGLKDPKRPIGSF IFLGPTGVGKTELAKALTEYLFDSEDALIRIDMSEYMEKFSVSRLIGAPPGYVGYEEGGQLTEKVRRKPYSVVLLDEIEK AHPDVFNILLQVLDDGILTDGLGRRVDFRNTIIIMTSNIGAREIKNLGKGIGFAQTEQPFNYQAMKSTVEDALKRVFNPE FLNRIDDVIVFQPLEKQHIYQIIDLMISDLLKRAGDLGIQVEFTQAAKDFLVEKGYDPQYGARPLRRAIQKYVEDPLAEA ILSNEVKEGDLVVINYDESVKPGELIFEARPAAEAASSEKPETAEEGTSE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| clpC | YP_005163377.1 | ATP-dependent Clp protease ATP-binding subunit | Not tested | Not named | Protein | 0.0 | 52 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Rhom172_1398 | YP_004825161.1 | ATPase AAA-2 domain-containing protein | VFG0079 | Protein | 0.0 | 56 |
