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Name : Rhom172_1251 (Rhom172_1251) Accession : YP_004825015.1 Strain : Rhodothermus marinus SG0.5JP17-172 Genome accession: NC_015966 Putative virulence/resistance : Virulence Product : DNA mismatch repair protein mutS Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0249 EC number : - Position : 1431218 - 1433914 bp Length : 2697 bp Strand : + Note : SMART: DNA mismatch repair protein MutS, C-terminal; DNA mismatch repair protein MutS, core; TIGRFAM: DNA mismatch repair protein MutS, type 1; KEGG: rmr:Rmar_1542 DNA mismatch repair protein MutS; HAMAP: DNA mismatch repair protein MutS, type 1; PFAM: DN DNA sequence : ATGGCTTCCAGAGAAGCGGAGAAGCAGGTGGGGCAGACGCCGCTCATGCGGCAGTACTACAAGATCAAGTCCCGCTATCC GAACGCCATCCTGCTGTTTCGGATGGGGGACTTCTACGAGACCTTCGACGAAGACGCGCACATCGTCAGCCGGGTGCTGG GCATCACGCTGACGAAGCGATCCAACGGTCAGGCGGCCGACGTGCCGCTGGCGGGCTTTCCGCACCACGCGCTGGACAAC TACCTGCCGAAACTGGTGCGGGCCGGCTATCGGGTGGCCATCTGCGAGCAACTCGAAGATCCCAAATTCGCCCGCAAGGT CGTCAAGCGCGACGTCGTCGAGGTCGTCACGCCGGGCGTCTCGTTCCACGAGCACCTGCTCGATCCCAAGCGGGCCAACT ACCTGGCCGCCGTGGTCTGGGGTACCGAACGGGGCGAGCGTGACCGCATCGGCTTTGCCTTTCTGGACGCCTCGACGGGC GAGTTTTCGGTCACGGAGGCGCCGGCCCATCGCCTGGAAGATCTGCTGCAGACGATTCAGCCGGCCGAGGTGCTCGTCGA TAAACGCCAGCGTGACCGACTGCAGAGCGTGCGGGGCCTTTCGTTTGTCGTCACACCCCAGGAGGACTGGGTCTTCAACT TCGACTACGCCTACGAAGTGCTGCTCCGGCACTTCAAGACGCATTCGCTCAAGGGCTTTGGCGTCGATGACCTGCGGCTG GGGCTCCGGGCGGCCGGGGCGGCACTGCACTACCTGGGCGAGACGCAGAAAGGTCGGCTGCCCCACGTGCGTCGGTTGAC GCGCTACGTCACCGACGAATACATGGTGCTCGATCCGCAGACGAAGCGCAACCTGGAGCTGGTCGCCTCGCTGCAGGACG GCACGCAGGAAGGCTCGCTCGTGCAGATCCTCGACGAGACGCTCACGCCGATGGGCGGCCGACTGCTCCGGCGCTGGCTG CTGCGGCCGCTCAAGAACGTACGCCAGATCGAAAAGCGCCTGGAGGCCGTCGAGGCGCTTGTGCGCGATCGCCGGCTCCG TGAGCGCCTGCGCGAGGAACTGCGCCAGGTGGGCGACCTGGAGCGACTGGCCGCCCGCGTCTGCACCGGACGCGCCACGC CGCGCGATCTGATGCACCTGCGACTGACGCTCGAACAGATCCCGCCCATCAAGCAGGCACTGGCCGACGTGTCCTGCGAC ACGCTGCGCCGACTGGCCGAACAGCTCACGCTCTGCACGCAGGTGGTCGAGCGCATCCGCCAGGCGCTCGTCGACGATCC GCCAGCCTCGCTGAGCGACGGCGGCGTGATTCGCGACGGCTTCAGCGCCGAGCTGGATGAACTGCGCGAGATCGCCCGCT CCGGTAAGGACTTCATCGCTCGCCTGCAGCAGAAAGAGATCGAGCGCACGGGCATCCCGTCGCTCAAGGTGGGCTTCAAC AAGGTGTTCGGCTATTACATCGAAGTCACCAACGCCCACCGCAACAAAATCCCGCCGCATTACATCCGCAAGCAGACGCT GGTCAATGCCGAGCGCTACATCACGCCGGAGCTGAAAGAGTACGAGGAAAAAATTCTCTCGGCCGAGGAGAAGATCGCCA GCCTGGAGGCCGAGTTGTTCAACCGGTTGCGTCTGGAGGTGGCCGAGGCGACGGCCGAGCTGCAGCTCAACGCGTCGCTG CTGGCCATGCTCGATGTGTTCTGCAGCCTGGCCGAAGTGGCCGATCGTTACGGCTACACGCGACCGGAACTGCACGAGGG CACCGAGCTGCTCATCGAAGAAGGCCGCCATCCGGTGGTCGAGCGTACGCTACCGCCCGGCGAGCCGTTCATCCCGAACG ACATCTACCTCGACACGCACGCGCAGCAGATCCTGATCATCACGGGACCGAACATGGCCGGCAAGAGCGTGGTGCTGCGC CAGACCGGCCTGATCGTACTGCTGGCGCAGATCGGTTCGTTCGTGCCGGCCCGCCGCGCCCGCATCGGGATCGTCGATCG CATCTTCACGCGTGTGGGCGCTTCGGACAACCTGGCCGCCGGCGAGAGTACGTTTCTCGTCGAAATGAACGAGACGGCCA ACATTCTCAACAATGCCACGCCGCGCTCGCTGATCCTGCTCGACGAGGTGGGGCGGGGTACTTCGACGTTCGACGGGCTG TCGATCGCCTGGGCGCTTGTCGAGTACCTGCACGAGACGCCCTCGGTGGCCGCGCGCACGCTGTTCGCCACGCACTACCA CGAACTGAACGAACTGGCCGAACGCTTCCCGCGCGTGAAGAACTTCCGCGTGCAGGTCGAGGAGCACGACGGCCGGGTGA TCTTTCTGCACAAACTGGTGCCGGGCGGGGCCGACCATTCCTACGGCATCGAGGTGGCCCGCATGGCCGGATTGCCCGAG CCGGTCATTGCGCGCGCCCGTGAGATCCTGCGCCATCTGGAGGCGCAGCACCTTGTGGTCGAAGCACCGGCCGGCGACGG CGAGCCCGTGCGTCCCGTGCGGGCACGACGGGCCGAACGCATTCCCGCCGACACGTCGGCCTTCCAGCTTTCGCTCTTTG CGCAACCCGAGCCCGATCCGGTTGCCGAGGAGCTCAAAGAGCGGCTGCGCCGGATCGATCCCAACCGCATGACGCCCATC GAGGCCCTGCTCCTGCTCGACGAACTCAAGCGGCTTGTGGAACGCCATGATTCGTGA Protein sequence : MASREAEKQVGQTPLMRQYYKIKSRYPNAILLFRMGDFYETFDEDAHIVSRVLGITLTKRSNGQAADVPLAGFPHHALDN YLPKLVRAGYRVAICEQLEDPKFARKVVKRDVVEVVTPGVSFHEHLLDPKRANYLAAVVWGTERGERDRIGFAFLDASTG EFSVTEAPAHRLEDLLQTIQPAEVLVDKRQRDRLQSVRGLSFVVTPQEDWVFNFDYAYEVLLRHFKTHSLKGFGVDDLRL GLRAAGAALHYLGETQKGRLPHVRRLTRYVTDEYMVLDPQTKRNLELVASLQDGTQEGSLVQILDETLTPMGGRLLRRWL LRPLKNVRQIEKRLEAVEALVRDRRLRERLREELRQVGDLERLAARVCTGRATPRDLMHLRLTLEQIPPIKQALADVSCD TLRRLAEQLTLCTQVVERIRQALVDDPPASLSDGGVIRDGFSAELDELREIARSGKDFIARLQQKEIERTGIPSLKVGFN KVFGYYIEVTNAHRNKIPPHYIRKQTLVNAERYITPELKEYEEKILSAEEKIASLEAELFNRLRLEVAEATAELQLNASL LAMLDVFCSLAEVADRYGYTRPELHEGTELLIEEGRHPVVERTLPPGEPFIPNDIYLDTHAQQILIITGPNMAGKSVVLR QTGLIVLLAQIGSFVPARRARIGIVDRIFTRVGASDNLAAGESTFLVEMNETANILNNATPRSLILLDEVGRGTSTFDGL SIAWALVEYLHETPSVAARTLFATHYHELNELAERFPRVKNFRVQVEEHDGRVIFLHKLVPGGADHSYGIEVARMAGLPE PVIARAREILRHLEAQHLVVEAPAGDGEPVRPVRARRAERIPADTSAFQLSLFAQPEPDPVAEELKERLRRIDPNRMTPI EALLLLDELKRLVERHDS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| mutS | AAA80578.1 | DNA mismatch repair protein | Virulence | SPI-1 | Protein | 6e-130 | 43 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Rhom172_1251 | YP_004825015.1 | DNA mismatch repair protein mutS | VFG0562 | Protein | 2e-140 | 45 |
