Gene Information

Name : Rhom172_1200 (Rhom172_1200)
Accession : YP_004824965.1
Strain : Rhodothermus marinus SG0.5JP17-172
Genome accession: NC_015966
Putative virulence/resistance : Virulence
Product : iron-chelate-transporting ATPase
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1120
EC number : 3.6.3.34
Position : 1386137 - 1386925 bp
Length : 789 bp
Strand : -
Note : PFAM: ABC transporter-like; KEGG: rmr:Rmar_1591 ABC transporter related protein; SMART: ATPase, AAA+ type, core

DNA sequence :
ATGGTTGCAGCCAGTGGATTGCGGGTAGCACTTGGTGGACGTACGATTCTGGACGGGCTCACCTTCGAGATCCCGGCCGG
TTCCTTCGTGGGGCTGCTTGGACCGAACGGCAGCGGCAAAACCACATTGATCCGCACGATCAGCGGCGTGCTCCCCTATG
CCGGAACGCTCTCGCTGCGGGGACGGCCGCTGCGGAACTGGCCGCGCCGGGCCCTGGCCCGCCAGGTGGCCGTCGTGCGC
CAGGCCCCCACGCTGGCGTTCGACTTCACCGTCGAAGACATCGTGCTGCTGGGTCGCGCCCCCCACAAGGGCTGGCTCGA
GCCGTTCACGGCCGCCGACCGCGCCCGCGTGCGCGAAGCGCTGGCGGCCGTCGATCTGGCCGACGCCGCCCACCGGCTGA
TCCATACGCTCAGCGGCGGCGAGCAGCAGCGTGTCTTTCTGGCGCAGGCACTGGCCCAGGAGGCCAGCCTCTTACTGCTC
GACGAGCCCACGGCCCACCTGGACGTGCACTACCAGTTCGAGTTTCTGGACCGCGTGCGCGCGCTGGTGGCCGAAGGACG
CACGGTGGTGGCCGTCTTTCACGACCTGTCGCTGGCCGCCCGCTACGCCGATCGCCTGCTCGTGCTGCATCGGGGCCGCC
TCGTGGCCGACGGTCCCCCGGCCGAAGTGCTCGCCGAAGCGCTCATCGCCCGCGTCTTCCGCATGGCCGCCCGTATCCAC
TACCTGCCCGACGGCCTGCCCTGCATTCAGTACCTCCACCCGATCACCGAAAACGCAACGTCCGCATGA

Protein sequence :
MVAASGLRVALGGRTILDGLTFEIPAGSFVGLLGPNGSGKTTLIRTISGVLPYAGTLSLRGRPLRNWPRRALARQVAVVR
QAPTLAFDFTVEDIVLLGRAPHKGWLEPFTAADRARVREALAAVDLADAAHRLIHTLSGGEQQRVFLAQALAQEASLLLL
DEPTAHLDVHYQFEFLDRVRALVAEGRTVVAVFHDLSLAARYADRLLVLHRGRLVADGPPAEVLAEALIARVFRMAARIH
YLPDGLPCIQYLHPITENATSA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
CDCE8392_1767 YP_005134301.1 iron complex transport system ATP-binding protein Virulence Not named Protein 4e-23 43
cpfrc_01918 YP_003784318.1 hypothetical protein Not tested PiCp 7 Protein 8e-19 43
phuC YP_005684259.1 Iron(III) dicitrate transport permease-like protein yusV Virulence PiCp 7 Protein 6e-19 42
phuC YP_005682167.1 Iron(III) dicitrate transport permease-like protein yusV Virulence PiCp 7 Protein 6e-19 42
fagC YP_005682397.1 ATP binding cytoplasmic membrane protein Virulence PiCp 1 Protein 7e-28 42
fagC YP_005684488.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 7e-28 42
fagC YP_005680307.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 6e-28 42
fagC YP_003782430.1 ABC transporter ATP-binding protein Not tested PiCp 1 Protein 6e-28 42
phuC YP_005686351.1 Iron(III) dicitrate transport permease-like protein yusV Virulence PiCp 7 Protein 6e-19 41