|
Name : PARA_09650 (PARA_09650) Accession : YP_004822660.1 Strain : Haemophilus parainfluenzae T3T1 Genome accession: NC_015964 Putative virulence/resistance : Unknown Product : DNA topoisomerase III Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0550 EC number : - Position : 961930 - 963873 bp Length : 1944 bp Strand : + Note : - DNA sequence : ATGCGCCTGTTTATTGCCGAGAAACCCAGTCTTGGGCGAGCGATTGCCGATGTATTGCCAAAACCTCATCAGCGGGGTGA TGGTTTTATTAAATGTGGCAATGATGATGTTGTGACTTGGTGCGTGGGGCATTTGCTCGAACAAGCAGAACCGGATGCCT ACGATCCTAAATTTAAACAATGGCGTTTAGAACATTTACCCATCATTCCTGAAAAATGGATTTTGTTACCGCGAAAAGAA GTTAAAAAACAACTTTCCGTGGTGGAAAAACTTATTCATCAAGCTGATGTTTTAGTTAACGCAGGCGACCCGGATAGAGA AGGGCAGTTGCTGGTGGATGAAGTGTTCAGCTATGCCAATTTATCAGCCGAAAAACGTGATGGCATTTTGCGTTGTCTGA TTAGCGATCTTAACCCCAGCGCGGTCGAAAAAGCCGTACAAAAGCTCCAACCGAATCGTAACTTTATCCCATTAGCCACC TCCGCACTGGCGCGTGCTCGTGCCGATTGGCTTTATGGCATTAATATGACCCGCGCTTATACCATTCGGGGTCGCCAAGC GGGTTATGATGGCGTGCTGTCTGTTGGGCGAGTGCAAACGCCCGTATTAGGTTTGATTGTTCGACGTGATTTGGAAATTG AAAATTTCCAACCAAAAGATTTCTATGAAGTGTTGGCGTGGGTAAAAGAAGAAAAAACATCTGAAAATCCAACCGCACTT TTTTCTGCACTTTGGCAACCAAGTAAAGCTTGCGAAGACTACCAAGATGAAGATGGTCGTGTGCTGTCTTTAGGCTTAGC CGAAAATGTAGTGAAGCGTATTACCGATCAACCTGCCGAAGTGACAGAATATGTAGATAAGCGCGAGAAAGAAACGGCGC CTTTGCCTTATTCGTTGTCAGCATTGCAGATTGATGCGGCAAAACGTTTTGGCATGTCAGCGCAAAGCGTGTTGGATACC TGTCAGCGGTTATATGAAACCCATCGTTTGATTACCTATCCACGTTCGGATTGTCGCTATTTGCCGGAAGAGCATTTTGC TGAACGACATAAAGTGATGAATGCCATTTCTCAGCATTGTCAGACGTACCAAACCTTGCCATTGGTGGTAGATACTGAGC AACGTAATCGTTGTTGGAATGATAAAAAAGTGGAAGCGCACCATGCCATTATTCCGACAGCTAACACGCGCTCGATCAAT TTAAGTATTGATGAACAACGTATTTATGAATTGATTGCGCGTCAGTATTTATTGCAATTCTGTCCAGATGCGGAATATCG TAAAAGCAAAATTATCTTAAGTATTGCGGGCGGTACTTTTGTGGCTCAAGCGCGCAACTTGCAAACTGCGGGTTGGAAAG AATTGCTTGGTAAAGAAGACGAAGATGAAAATCAAGAGCCGTTATTGCCGATCGTGAAGAAAGGGCAGATCCTGTACTGC GAACGAGGCGAAGTGGTGAGCAAAAAAACGCAACCGCCGAAACCATTTACTGATGCGACGTTGCTTTCCGCCATGACAGG GATTGCGCGCTTTGTGCAAGATAAAGAATTGAAAAAAATTCTGCGAGAAACAGATGGACTTGGCACAGAAGCCACGCGCG CAGGTATTATCGAATTGCTGTTTAAACGAGGCTTTTTGACCAAAAAAGGACGAAATATTCACAGCACAGAAACGGGGCGG ATCCTCATTTCAGCATTACCAGATATTGCCACACAACCTGATATGACGGCACATTGGGAAGCGCAATTAACGGATATCAG TCAAAAACAAGCGAGTTATCAGCAATTTATGTTTACGCTCAATCAAATGTTGCCGGATTTAGTGCGCTTTGTGGATTTCA CCGCATTACGTCGTCTAAGTCAGATTTCAAAAGGTTTAAGCACACCAGCAACGAAACGAAAAAGAGCGGTCAAAAAATCG GAAGATTTAAACGCTGAAAATTGA Protein sequence : MRLFIAEKPSLGRAIADVLPKPHQRGDGFIKCGNDDVVTWCVGHLLEQAEPDAYDPKFKQWRLEHLPIIPEKWILLPRKE VKKQLSVVEKLIHQADVLVNAGDPDREGQLLVDEVFSYANLSAEKRDGILRCLISDLNPSAVEKAVQKLQPNRNFIPLAT SALARARADWLYGINMTRAYTIRGRQAGYDGVLSVGRVQTPVLGLIVRRDLEIENFQPKDFYEVLAWVKEEKTSENPTAL FSALWQPSKACEDYQDEDGRVLSLGLAENVVKRITDQPAEVTEYVDKREKETAPLPYSLSALQIDAAKRFGMSAQSVLDT CQRLYETHRLITYPRSDCRYLPEEHFAERHKVMNAISQHCQTYQTLPLVVDTEQRNRCWNDKKVEAHHAIIPTANTRSIN LSIDEQRIYELIARQYLLQFCPDAEYRKSKIILSIAGGTFVAQARNLQTAGWKELLGKEDEDENQEPLLPIVKKGQILYC ERGEVVSKKTQPPKPFTDATLLSAMTGIARFVQDKELKKILRETDGLGTEATRAGIIELLFKRGFLTKKGRNIHSTETGR ILISALPDIATQPDMTAHWEAQLTDISQKQASYQQFMFTLNQMLPDLVRFVDFTALRRLSQISKGLSTPATKRKRAVKKS EDLNAEN |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| pph56 | CAI36097.1 | Topoisomerase IA | Not tested | PPHGI-1 | Protein | 6e-102 | 42 |
| topB | AAF14809.1 | topoisomerase B | Not tested | SPI-7 | Protein | 7e-110 | 41 |
| topB | NP_458624.1 | topoisomerase B | Not tested | SPI-7 | Protein | 9e-110 | 41 |
| topB | NP_807836.1 | DNA topoisomerase III | Not tested | SPI-7 | Protein | 9e-110 | 41 |
| topB | AAN62317.1 | putative DNA topoisomerase III | Not tested | PAGI-3(SG) | Protein | 2e-101 | 41 |
