Gene Information

Name : PARA_09650 (PARA_09650)
Accession : YP_004822660.1
Strain : Haemophilus parainfluenzae T3T1
Genome accession: NC_015964
Putative virulence/resistance : Unknown
Product : DNA topoisomerase III
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG0550
EC number : -
Position : 961930 - 963873 bp
Length : 1944 bp
Strand : +
Note : -

DNA sequence :
ATGCGCCTGTTTATTGCCGAGAAACCCAGTCTTGGGCGAGCGATTGCCGATGTATTGCCAAAACCTCATCAGCGGGGTGA
TGGTTTTATTAAATGTGGCAATGATGATGTTGTGACTTGGTGCGTGGGGCATTTGCTCGAACAAGCAGAACCGGATGCCT
ACGATCCTAAATTTAAACAATGGCGTTTAGAACATTTACCCATCATTCCTGAAAAATGGATTTTGTTACCGCGAAAAGAA
GTTAAAAAACAACTTTCCGTGGTGGAAAAACTTATTCATCAAGCTGATGTTTTAGTTAACGCAGGCGACCCGGATAGAGA
AGGGCAGTTGCTGGTGGATGAAGTGTTCAGCTATGCCAATTTATCAGCCGAAAAACGTGATGGCATTTTGCGTTGTCTGA
TTAGCGATCTTAACCCCAGCGCGGTCGAAAAAGCCGTACAAAAGCTCCAACCGAATCGTAACTTTATCCCATTAGCCACC
TCCGCACTGGCGCGTGCTCGTGCCGATTGGCTTTATGGCATTAATATGACCCGCGCTTATACCATTCGGGGTCGCCAAGC
GGGTTATGATGGCGTGCTGTCTGTTGGGCGAGTGCAAACGCCCGTATTAGGTTTGATTGTTCGACGTGATTTGGAAATTG
AAAATTTCCAACCAAAAGATTTCTATGAAGTGTTGGCGTGGGTAAAAGAAGAAAAAACATCTGAAAATCCAACCGCACTT
TTTTCTGCACTTTGGCAACCAAGTAAAGCTTGCGAAGACTACCAAGATGAAGATGGTCGTGTGCTGTCTTTAGGCTTAGC
CGAAAATGTAGTGAAGCGTATTACCGATCAACCTGCCGAAGTGACAGAATATGTAGATAAGCGCGAGAAAGAAACGGCGC
CTTTGCCTTATTCGTTGTCAGCATTGCAGATTGATGCGGCAAAACGTTTTGGCATGTCAGCGCAAAGCGTGTTGGATACC
TGTCAGCGGTTATATGAAACCCATCGTTTGATTACCTATCCACGTTCGGATTGTCGCTATTTGCCGGAAGAGCATTTTGC
TGAACGACATAAAGTGATGAATGCCATTTCTCAGCATTGTCAGACGTACCAAACCTTGCCATTGGTGGTAGATACTGAGC
AACGTAATCGTTGTTGGAATGATAAAAAAGTGGAAGCGCACCATGCCATTATTCCGACAGCTAACACGCGCTCGATCAAT
TTAAGTATTGATGAACAACGTATTTATGAATTGATTGCGCGTCAGTATTTATTGCAATTCTGTCCAGATGCGGAATATCG
TAAAAGCAAAATTATCTTAAGTATTGCGGGCGGTACTTTTGTGGCTCAAGCGCGCAACTTGCAAACTGCGGGTTGGAAAG
AATTGCTTGGTAAAGAAGACGAAGATGAAAATCAAGAGCCGTTATTGCCGATCGTGAAGAAAGGGCAGATCCTGTACTGC
GAACGAGGCGAAGTGGTGAGCAAAAAAACGCAACCGCCGAAACCATTTACTGATGCGACGTTGCTTTCCGCCATGACAGG
GATTGCGCGCTTTGTGCAAGATAAAGAATTGAAAAAAATTCTGCGAGAAACAGATGGACTTGGCACAGAAGCCACGCGCG
CAGGTATTATCGAATTGCTGTTTAAACGAGGCTTTTTGACCAAAAAAGGACGAAATATTCACAGCACAGAAACGGGGCGG
ATCCTCATTTCAGCATTACCAGATATTGCCACACAACCTGATATGACGGCACATTGGGAAGCGCAATTAACGGATATCAG
TCAAAAACAAGCGAGTTATCAGCAATTTATGTTTACGCTCAATCAAATGTTGCCGGATTTAGTGCGCTTTGTGGATTTCA
CCGCATTACGTCGTCTAAGTCAGATTTCAAAAGGTTTAAGCACACCAGCAACGAAACGAAAAAGAGCGGTCAAAAAATCG
GAAGATTTAAACGCTGAAAATTGA

Protein sequence :
MRLFIAEKPSLGRAIADVLPKPHQRGDGFIKCGNDDVVTWCVGHLLEQAEPDAYDPKFKQWRLEHLPIIPEKWILLPRKE
VKKQLSVVEKLIHQADVLVNAGDPDREGQLLVDEVFSYANLSAEKRDGILRCLISDLNPSAVEKAVQKLQPNRNFIPLAT
SALARARADWLYGINMTRAYTIRGRQAGYDGVLSVGRVQTPVLGLIVRRDLEIENFQPKDFYEVLAWVKEEKTSENPTAL
FSALWQPSKACEDYQDEDGRVLSLGLAENVVKRITDQPAEVTEYVDKREKETAPLPYSLSALQIDAAKRFGMSAQSVLDT
CQRLYETHRLITYPRSDCRYLPEEHFAERHKVMNAISQHCQTYQTLPLVVDTEQRNRCWNDKKVEAHHAIIPTANTRSIN
LSIDEQRIYELIARQYLLQFCPDAEYRKSKIILSIAGGTFVAQARNLQTAGWKELLGKEDEDENQEPLLPIVKKGQILYC
ERGEVVSKKTQPPKPFTDATLLSAMTGIARFVQDKELKKILRETDGLGTEATRAGIIELLFKRGFLTKKGRNIHSTETGR
ILISALPDIATQPDMTAHWEAQLTDISQKQASYQQFMFTLNQMLPDLVRFVDFTALRRLSQISKGLSTPATKRKRAVKKS
EDLNAEN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
pph56 CAI36097.1 Topoisomerase IA Not tested PPHGI-1 Protein 6e-102 42
topB NP_458624.1 topoisomerase B Not tested SPI-7 Protein 9e-110 41
topB NP_807836.1 DNA topoisomerase III Not tested SPI-7 Protein 9e-110 41
topB AAF14809.1 topoisomerase B Not tested SPI-7 Protein 7e-110 41
topB AAN62317.1 putative DNA topoisomerase III Not tested PAGI-3(SG) Protein 2e-101 41