Gene Information

Name : PARA_06380 (PARA_06380)
Accession : YP_004822336.1
Strain : Haemophilus parainfluenzae T3T1
Genome accession: NC_015964
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1132
EC number : -
Position : 631615 - 633339 bp
Length : 1725 bp
Strand : -
Note : -

DNA sequence : 
ATGAGTAAGCAGCACCAACAAATTTGCCAACCTGTTGCCGCGCAATTACGTGCCTCAATGTGGTTGGCAACCTTCGCACA
AGGCTTAAAAATCGGGATTTGGCTTTTGATGATCCACATTGTGTTCACCGTCAGCCAATTTCTTACGTTTCCTTATTGGC
AGATTTTCGCGCTACTTTTCACGTCCATTTTGTATTACACCTGCAAAATTAAAGCGCACGACAAATCTCATTATGCGGCC
TTTGAATTGGAAAAAATGCTACGCCAACAGCTTACAAAAAAAATCAGTCAATTATCGTTAGGCAAAGTCAATGAAATTGG
GTCTGGCGGTTTAACGAAAGTGCTGTGCGATGACGTAAACGAATTGCACACTTTTGTTGCCGATGCACCGCCACTTAAAG
CGGAGGCTTATTCCACACCAATTTTTGTATTAGCAGCATTGTTTTGGTTAAATTGGCCCATGGCATTGGCTGTGGTGATT
TTCCTTGTCGTGTTGTTTACGATTCTGCAACGTTTAATGCAAAAAAGTCGATTGAATTATCGTGATTACGGTGCTGCTGT
GAGTCAAATCAATAGCGCGATTATTGAATATATTCAGGGTATGAGCACGATTCGTACCTTTGATGCGGGACAAAGTTCGT
ACAGCCGTTTTAGCACCGCATTGGAAAATTTTAATCAGGTTATCTTCGCTTTTTTAGCCAAAGTGGGCGCCCCAACACGT
CTTGCCCGTTCGCTCTTTACGCCAATGCCGATCATGTTGTTTTTGATCGTGTTAGGCGTGTATTTACACTCACTTGCGCT
GCTTTCCACCTTTGGCTTTTTTGCCTTTTTAGTGTTAGCCGCCGGCTTAATTGAAACCATGCATCCATACATGGGGCTGT
TTCATTTGTTGGAACGCTCCCGCGCTGCCATTGAACGCATTAACGAAATAAAAACGTTGGAAAATGCCACCGCACTTTTG
CCGTTACAAACACCGAAGGGGTATGCTGTTCAATTTGAACAGGTTAATTTCAGCTATGATGCCGACAAAGCGACGCTGAA
AAATATTGACTTTATTGTGCCGCAAAATAGCTTTACCGCGATTATTGGCACTTCAGGCTCCGGCAAAACTACCTTGCTCA
ATTTGCTGTTGCGCTTTTGGGATGTCGATAGCGGAAAAATCACCTTAGGTGGTGCGGATATTCGTCATATGGAACAGGAT
CAACTCATGAAATATTGTTCGGTCGTATTTCAGGATAACTTCTTATTTTCTTGCTCTATTGCCGAAAACATCGCTTACGG
CATAGAAAATATGACGGAAGAAGCCATTATCAATGCCGCCAAACAAGCCCGTATTCACGACTTTATTATGACCTTGCCGG
AGCAATATCAAACGAAAGTGGGGGAACGCGGACAATTATTGTCAGGTGGACAAAAACAACGCATCAGTATAGCCCGAGCC
TTTTTACAAAATCGCCCGATTTTATTGTTAGACGAACCCACAGCCTTTTCCGATGCAAAAAACGAGGCGGATTTAATGCA
GGCCTTTCATGCGCTGATGCAAAATAAAACAGTGATCATGGTAGCGCATCGCCTGTCTAGCATTACCCAAGCCGATCAAA
TTATTTATTTAGAGAACGGAAAAATCATCGCTCAAGGCAATCACCAAGCCTTGTTGCAAACCAATGTTGCCTATCAAGCC
CTTTGGGCGGAATATCAACAGGCAAAATCTTGGACGATACATTAG

Protein sequence : 
MSKQHQQICQPVAAQLRASMWLATFAQGLKIGIWLLMIHIVFTVSQFLTFPYWQIFALLFTSILYYTCKIKAHDKSHYAA
FELEKMLRQQLTKKISQLSLGKVNEIGSGGLTKVLCDDVNELHTFVADAPPLKAEAYSTPIFVLAALFWLNWPMALAVVI
FLVVLFTILQRLMQKSRLNYRDYGAAVSQINSAIIEYIQGMSTIRTFDAGQSSYSRFSTALENFNQVIFAFLAKVGAPTR
LARSLFTPMPIMLFLIVLGVYLHSLALLSTFGFFAFLVLAAGLIETMHPYMGLFHLLERSRAAIERINEIKTLENATALL
PLQTPKGYAVQFEQVNFSYDADKATLKNIDFIVPQNSFTAIIGTSGSGKTTLLNLLLRFWDVDSGKITLGGADIRHMEQD
QLMKYCSVVFQDNFLFSCSIAENIAYGIENMTEEAIINAAKQARIHDFIMTLPEQYQTKVGERGQLLSGGQKQRISIARA
FLQNRPILLLDEPTAFSDAKNEADLMQAFHALMQNKTVIMVAHRLSSITQADQIIYLENGKIIAQGNHQALLQTNVAYQA
LWAEYQQAKSWTIH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ybtP CAA21388.1 - Virulence HPI Protein 2e-88 43
ybtP NP_669704.1 permease and ATP-binding protein of yersiniabactin-iron ABC transporter Virulence HPI Protein 2e-88 43
ybtP NP_993009.1 permease and ATP-binding protein of yersiniabactin-iron ABC transporter Virulence HPI Protein 2e-88 43
ybtP YP_853073.1 inner membrane ABC-transporter Not tested PAI IV APEC-O1 Protein 1e-88 43
irp6 YP_001006813.1 lipoprotein inner membrane ABC-transporter Not tested HPI Protein 7e-89 43
irp6 CAB46573.1 lipoprotein inner membrane ABC-transporter, Irp6 Virulence HPI Protein 1e-88 43
ybtP YP_070126.1 lipoprotein inner membrane ABC-transporter Virulence HPI Protein 4e-88 43
irp6 YP_002346904.1 lipoprotein inner membrane ABC transporter Not tested HPI Protein 2e-88 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PARA_06380 YP_004822336.1 hypothetical protein BAC0432 Protein 1e-88 43