Gene Information

Name : PARA_06370 (PARA_06370)
Accession : YP_004822335.1
Strain : Haemophilus parainfluenzae T3T1
Genome accession: NC_015964
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1132
EC number : -
Position : 629834 - 631606 bp
Length : 1773 bp
Strand : -
Note : -

DNA sequence :
ATGCAATCTTACTTTAATCCCGAAACTCAACGTGTAAAAAACCTGTGGCAAACTTATCACGCCTTATTTGCCGCCGCCCA
ACAGCAACAAAGCGCATTCTTACGCTGTCTCGCTTTTGCGGCACTGTCTGCAATTTTATTCGGCGTGGCTATCGGCTTGC
TTTATCCGCTGCTTCTGGCATTAGAACAAACTGAAGCAGGGCAAAGTGCGGTCATTTTTTGGAGTATTTTATGTGGCATG
CTTTTAGTCGCCAGCCTCCTTTTCCGCATTTGGGCGGAATATTATGACACTAAAGGCGATTCATTTTTGGCGACATATCA
ATTAAGACGTCAACTGGGCGAAAAACTCCGCCGCGTATCTCTTGCCGTCCTCAGTGGATTTCGTGCAGGCGAACTCAGTG
CCGTTGCCATCCAAAGTATTAATGAAGCCACAAATTACGCATTCAGTTTAATCAGTATTCTAATTTATGGCATCGTAACA
CCAGTGTCTGCTGCCCTTTGTCTTTGTTTCTTTGATTACCGCTTTGGGCTGCTGATCTTCATTATTTTTCCGCTTATCGT
GCCACTTTATTTATGGAGGAGAAAAGCTTTCCGTCGTGGATTTAGTATTTTGGCAGAAGCTAATCAGCGACTTAAAGGCG
AAACCATTGAGTTTGTACAAGGCTTGGAAATTCTGAAATCAACGGGGCAGACTGACAACAAACAACATATTTTCAACCGT
GTGATTGAAGATGTGGCCAACATTCAACGCATTGGCACAAAAAAAGGCGAACGTCCGAATTTGATTATTACCTCAAGCAT
TCAATTAAGTCTTATTGCCGTATTAATTGTTGGCACATTTTGGGTGATTTCTAGTAGCGCTCATTGGGTATTGTTAGCCA
CAGTACTGATTTTAATTGCACGAATTTCAGATGTATTGAACTTCTTTGTGCAAATGTCTTCGCTCTTAGAAATTTTTGTG
ATCAGCTGTGAAAAATTTGAAAAACTGATGGCATTACCTGAATTGATGGAAAATCATGGAAGCAGATTACCCACAGATTA
TCTCATTCGTTATGAGCATGTCAGTTTTGGTTACAATGCCGAAAAAACCATCCTAAATGACATTAATCTGGACATAAAAC
CTAACAGCCTCAATGCCTTTGTAGGCACTAGCGGTTGTGGTAAAACAACATTACTCCGCTTGCTGTTGCGTTACGCTGAT
CCGCAATCAGGACGAATTACGATCGGCGGTATCGATATTCGGGATGTTAGCCAAGAACAGCTCATGCGCTTAATTTCTGT
GGTGTTTCAAGACGTGTATTTATTCCAAGACAGCGTATTAAATAACATCCGAATGGCAAAACCCAATGCCACTGATGAAG
AAGTGATTCACGCCTGTAAACTTGCCCAATGCCACGATTTTATTCAGGCATTACCACAAGGGTACCAAACGCAAGTTAAT
GAAATTGGGAGTAATTTTTCCGGTGGTGAAAAGCAAAGACTTGCTATTGCCCGCGCAATTTTAAAAGATGCGCCGATTCT
CATTTTAGACGAACCGACGGCATCGTTGGATACCCGCAATGAGCTAGCAGTACAAAAAGCGCTAGATCAGTTGGTTAAAG
ACAAAACCGTGTTGATTATTGCTCACCGACTTTCCACCATTGTGGGTGCGCATTGCATTTATGTGTTGGAAAACGGCAGC
ATTGCCGAACAAGGCACGCATCAAACACTCTTAGAACAAAAAGGACGTTATGCAGCGTTTTGGCAATGCCAACAAGGCAA
CATTACTCACTAA

Protein sequence :
MQSYFNPETQRVKNLWQTYHALFAAAQQQQSAFLRCLAFAALSAILFGVAIGLLYPLLLALEQTEAGQSAVIFWSILCGM
LLVASLLFRIWAEYYDTKGDSFLATYQLRRQLGEKLRRVSLAVLSGFRAGELSAVAIQSINEATNYAFSLISILIYGIVT
PVSAALCLCFFDYRFGLLIFIIFPLIVPLYLWRRKAFRRGFSILAEANQRLKGETIEFVQGLEILKSTGQTDNKQHIFNR
VIEDVANIQRIGTKKGERPNLIITSSIQLSLIAVLIVGTFWVISSSAHWVLLATVLILIARISDVLNFFVQMSSLLEIFV
ISCEKFEKLMALPELMENHGSRLPTDYLIRYEHVSFGYNAEKTILNDINLDIKPNSLNAFVGTSGCGKTTLLRLLLRYAD
PQSGRITIGGIDIRDVSQEQLMRLISVVFQDVYLFQDSVLNNIRMAKPNATDEEVIHACKLAQCHDFIQALPQGYQTQVN
EIGSNFSGGEKQRLAIARAILKDAPILILDEPTASLDTRNELAVQKALDQLVKDKTVLIIAHRLSTIVGAHCIYVLENGS
IAEQGTHQTLLEQKGRYAAFWQCQQGNITH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
irp7 YP_002346905.1 ABC transporter permease Not tested HPI Protein 5e-93 44
ybtQ NP_669703.1 permease and ATP-binding protein of yersiniabactin-iron ABC transporter Virulence HPI Protein 5e-93 44
ybtQ NP_993010.1 ABC transporter permease Virulence HPI Protein 5e-93 44
ybtQ YP_070127.1 ABC transporter permease Virulence HPI Protein 5e-93 44
ybtQ CAA21387.1 - Virulence HPI Protein 5e-93 44
irp7 CAB46572.1 inner membrane ABC-transporter, Irp7 Virulence HPI Protein 2e-91 43
irp7 YP_001006812.1 inner membrane ABC-transporter YbtQ Not tested HPI Protein 3e-91 43
APECO1_1055 YP_853072.1 ABC transporter Not tested PAI IV APEC-O1 Protein 5e-92 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PARA_06370 YP_004822335.1 hypothetical protein BAC0433 Protein 2e-93 44