Gene Information

Name : PARA_00420 (PARA_00420)
Accession : YP_004821743.1
Strain : Haemophilus parainfluenzae T3T1
Genome accession: NC_015964
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1121
EC number : -
Position : 36146 - 37042 bp
Length : 897 bp
Strand : +
Note : -

DNA sequence : 
ATGACTGCACTTTCCGCTTCGATTTCCGTTAATGATGTAACCGTTCGTTACAACAACGGGCACACTGCAATTTATGATGT
TACCTTTGCATTACAAGGGGGAACAATCTGTGCCCTTGTCGGCGTAAATGGAAGCGGAAAATCAACGCTATTCAAAAGCA
TCATGGGCTTAATTAAACCACAGCAAGGCAATATTGCGCTTTGTGGTTTGCCAATTAATCGAGCATTGAAACAAAATTTG
GTTGCTTATGTACCGCAAGCGGAAGAAGTCGATTGGCAATTTCCAGTCTCCGTTTATGATGTTGTCATGATGGGACGCTA
CGGCTATATGAATTTCCTACGCATTCCAAAGGCTGAAGACAAACAAAAAGTGCTCGAAGCGATGCAACGAGTAAACATCG
AGCATTTAGCTGAACGGCAAATCGGCGAGCTTTCTGGTGGACAGAAAAAACGCGTATTTTTGGCTCGAGCATTAGCCCAA
CAAAGTAAGATTATCTTACTCGATGAGCCTTTTACAGGTGTGGATGTTAAAACTGAAAATGCTATTGTGGAACTCCTTCG
CCAATTACGTGCTGAAGGCCATTTAATTTTAGTTTCTACCCACAACTTGGGTTCTGTACCAGACTTCTGTGACCAAGTGG
TGATGATTAACCGTACTGTGATTGCTGCCGGTAAAACAGAAGATACATTCAATCAGCATAATTTGGAAAAAGTCTTTGGT
GGTGTATTACGACACGTCAAATTATTAGGTGAAGATCTGCATAATGATGAAGATAAACGTGCTGTCACCGTGCTTACGGA
TGATGAACGTCCCGTTGTCTTCTATGGTGAAACCAAAAATGATCCGCCCGCAACGGCTGTAAAATCCTGTCGTCTGCCTC
CGTCTGACAAGGAATAA

Protein sequence : 
MTALSASISVNDVTVRYNNGHTAIYDVTFALQGGTICALVGVNGSGKSTLFKSIMGLIKPQQGNIALCGLPINRALKQNL
VAYVPQAEEVDWQFPVSVYDVVMMGRYGYMNFLRIPKAEDKQKVLEAMQRVNIEHLAERQIGELSGGQKKRVFLARALAQ
QSKIILLDEPFTGVDVKTENAIVELLRQLRAEGHLILVSTHNLGSVPDFCDQVVMINRTVIAAGKTEDTFNQHNLEKVFG
GVLRHVKLLGEDLHNDEDKRAVTVLTDDERPVVFYGETKNDPPATAVKSCRLPPSDKE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sitB NP_461783.1 ATP-binding protein Virulence SPI-1 Protein 1e-74 61
sitB AAD41066.1 SitB Virulence centisome 63 pathogenicity island Protein 1e-74 61
sitB NP_457256.1 Iron transport protein, ATP-binding component Virulence SPI-1 Protein 2e-73 61
sitB NP_806465.1 iron ABC transporter ATP-binding protein Virulence SPI-1 Protein 2e-73 61
sitB YP_217782.1 iron transporter: fur regulated Virulence SPI-1 Protein 3e-74 61

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PARA_00420 YP_004821743.1 hypothetical protein BAC0440 Protein 1e-100 72
PARA_00420 YP_004821743.1 hypothetical protein BAC0350 Protein 6e-75 61
PARA_00420 YP_004821743.1 hypothetical protein BAC0400 Protein 3e-45 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PARA_00420 YP_004821743.1 hypothetical protein VFG0526 Protein 6e-75 61