Gene Information

Name : PARA_04010 (PARA_04010)
Accession : YP_004822102.1
Strain : Haemophilus parainfluenzae T3T1
Genome accession: NC_015964
Putative virulence/resistance : Unknown
Product : phage capsid scaffolding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 407045 - 407908 bp
Length : 864 bp
Strand : +
Note : -

DNA sequence :
ATGGCAATCTTTGAGCCAAACCAACCACAGAAAGGACAACCAATGGCAAAAAAATCTAAATGGGTCGTTGTCGCAACCGA
AGGTGCAACAACTGACGGTCGCACAATTCAGCGCAACTGGATTGAAGAAATGGCCGAAAGTTACGATCCAAAAAACACCT
ACGGCGCACGCATCAACCTTGACCACATCAAATTTTCTGTCTATATCCCTGAACTTGCCAATGCTCACTGCTTTGGTGAC
GTCTTAGCCGTGAAAGCAGAAGAACGTGAAGATGGCAAATTACAGCTTTTAGCCGAACTTCAACCAACTGATGCACTCAT
TGCCTTAAACCAAAAAGGACAAAAAGTTTACACGTCAGTGGAAATTGACACCAATTTTGCAGACACAGGCAAGGCATACT
TAGTCGGTTTAGCCGTTACGGATAATCCGGCAAGCTTAGGCACAGAAATGTTAAGTTTCTCGCACAATGGCTTAAATGCA
CGCAAGTTAAAAGCAGATAACATCTTCTCAGCCGCCATTGAAACCGAATTAGATTTCGAAGGTTGGGATGGTTTAGACCA
TCCATCAGTATTCACAAAAATCAAAGCGTTATTTGCGAAAAAAGAAAAATCGGATGATGAACGCTTTTCAGACCAATCCA
GTGCAATTGAGCTTTTAGCCGCACAACAAAAAGAAATCTTAGAAAAATTGACCGCACTTCAAGGCGATTTTGCAAATCAA
CAAGCCGAAATTGAAGAAATGAAAGCGAGCAATGAAGAAATCCATGCCACGTTTGAAGAACTCAAACAAAAGCCGGCACA
AGCCGAAAACCCCCGCCCATTAGTTTATGGTGAAGAACCTGAAACTGACGGCCGCTTCTTTTAA

Protein sequence :
MAIFEPNQPQKGQPMAKKSKWVVVATEGATTDGRTIQRNWIEEMAESYDPKNTYGARINLDHIKFSVYIPELANAHCFGD
VLAVKAEEREDGKLQLLAELQPTDALIALNQKGQKVYTSVEIDTNFADTGKAYLVGLAVTDNPASLGTEMLSFSHNGLNA
RKLKADNIFSAAIETELDFEGWDGLDHPSVFTKIKALFAKKEKSDDERFSDQSSAIELLAAQQKEILEKLTALQGDFANQ
QAEIEEMKASNEEIHATFEELKQKPAQAENPRPLVYGEEPETDGRFF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY4626 NP_458708.1 putative capsid protein Not tested SPI-7 Protein 1e-48 46
t4320 NP_807915.1 capsid protein Not tested SPI-7 Protein 1e-48 46
unnamed ABR13465.1 putative capsid scaffold Not tested PAGI-6 Protein 4e-45 45