Gene Information

Name : PARA_00410 (PARA_00410)
Accession : YP_004821742.1
Strain : Haemophilus parainfluenzae T3T1
Genome accession: NC_015964
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG0803
EC number : -
Position : 35265 - 36146 bp
Length : 882 bp
Strand : +
Note : -

DNA sequence : 
ATGAAGCATTTATTTAAAAGCCTATCTGTTATCGCTCTAGGTTTAGCTACTTTACAAGCCGAAGCAAAATTTAAAGTGGT
GACCACATTTACTGTTATTCAGGATATCGCACAAAATGTTGCGGGCGATGCTGCGACGGTGGAATCCATCACTAAACCCG
GTGCAGAAATTCACGAGTATGAACCTACCCCTAAAGATATTGTAAAAGCCCAATCTGCCGATTTAATTTTATGGAACGGA
TTAAATTTAGAGCGTTGGTTTGAGCGTTTCTTCCAAAATATCAAAGACAAACCAGCCGTTGTGGTAACCGAAGGCATTAC
GCCACTGTCTATTTATGAAGGCCCTTATAAAGATGCACCTAACCCACATGCTTGGATGTCGCCATCTAATGCGTTGATTT
ATGTCGAAAATATTAAAAATGCATTAGTTAAATACGATCCGCAAAATGCTGATACTTATCAAAAAAATGCGGCAGCATAT
GCAGAAAAAATCAAACAGCTCGATAAACCTTTACGTGAAAAACTCTCACAGATTCCTGCCAACCAACGTTGGTTAGTCAC
CAGTGAAGGTGCCTTTAGTTATTTAGCGAAAGATTACGATCTCAAAGAAGGCTATTTATGGCCAATTAACGCTGAACAAC
AAGGTACGCCTCAACAAGTGCGTAAACTTATCGATTTAGTGAAAAAAAATCATATTCCAGTGGTATTTAGTGAAAGTACC
GTGTCAGCAAAACCTGCTCAACAGGTAGCGAAAGAAAGTGATGCTAAGTACGGCGGCGTACTTTATGTCGATTCTCTTTC
TGCCGCTGACGGCCCTGTACCGACTTATGTCGATTTGCTCAATGTCACTGTATCCACCATCGTGAAAGGATTTGAAAAAT
AA

Protein sequence : 
MKHLFKSLSVIALGLATLQAEAKFKVVTTFTVIQDIAQNVAGDAATVESITKPGAEIHEYEPTPKDIVKAQSADLILWNG
LNLERWFERFFQNIKDKPAVVVTEGITPLSIYEGPYKDAPNPHAWMSPSNALIYVENIKNALVKYDPQNADTYQKNAAAY
AEKIKQLDKPLREKLSQIPANQRWLVTSEGAFSYLAKDYDLKEGYLWPINAEQQGTPQQVRKLIDLVKKNHIPVVFSEST
VSAKPAQQVAKESDAKYGGVLYVDSLSAADGPVPTYVDLLNVTVSTIVKGFEK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sitA NP_806464.1 iron transporter periplasmic-binding protein Virulence SPI-1 Protein 5e-96 68
sitA NP_461782.1 periplasmic binding protein Virulence SPI-1 Protein 5e-96 68
sitA AAD41065.1 SitA Virulence centisome 63 pathogenicity island Protein 3e-96 68
sitA YP_217781.1 iron transporter: fur regulated Virulence SPI-1 Protein 7e-96 68
sitA NP_457255.1 Iron transport protein, periplasmic-binding protein Virulence SPI-1 Protein 5e-96 68

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PARA_00410 YP_004821742.1 hypothetical protein BAC0439 Protein 2e-102 75
PARA_00410 YP_004821742.1 hypothetical protein BAC0349 Protein 2e-96 68

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PARA_00410 YP_004821742.1 hypothetical protein VFG0525 Protein 2e-96 68